@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : 003_tI_WHEAT: (2014-04-29 )
IDCGHVDSLVRPCLSYVQGGPSPSGQCCGGVQSLHNQAQSKSDRQAACNCLKGIARGIHNLNEDNARSLAPKCGVNLPYHISLDIDCNSV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
22 HHSearch 91.4686%-141 - C2 -1BWO - NLTP1_WHEAT -
1 Fugue 90.9985%-147 - C2 -1BWO 7.2 NLTP1_WHEAT
24 HHSearch 82.8948%-133 - C2 -1T12 - NLTP1_TOBAC -
21 HHSearch 81.7553%-135 - C2 -1AFH - NLTP_MAIZE -
11 SP3 79.3353%-131 - C2 -1FK5 4.9 NLTP_MAIZE
23 HHSearch 77.4244%-136 - C2 -2ALG 4.3 NLTP1_PRUPE
25 HHSearch 72.1939%-134 - C2 -1SIY - NLTP1_VIGRR -
34 HHSearch 54.9721%-159 - C2 -1BEA - ITRF_MAIZE -
2 Fugue 53.3524% -89 - C2 -2RKN - DIRL1_ARATH -
35 HHSearch 52.6925%-126 - C2 -1SM7 - ? -
17 SP3 51.6414%-145 - C2 -1HSS - IAA1_WHEAT -
38 HHSearch 51.3414%-157 - C2 -1HSS - IAA1_WHEAT -
36 HHSearch 50.4126% -94 - C2 -1PSY - 2SS_RICCO -
39 HHSearch 45.2216%-120 - C2 -2LVF - ? -
27 HHSearch 43.8523% -87 - C2 -2RKN - DIRL1_ARATH -
32 HHSearch 42.1414%-103 - C2 -1B1U - IAAT_ELECO -
16 SP3 41.4020%-103 - C2 -1QPO - NADC_MYCTU -
3 Fugue 40.8224% -64 - C2 -1L6H - NLTPX_ORYSJ -
33 HHSearch 39.0920% -99 - C2 -3OB4 - ? -
10 Fugue 36.0613% -88 - C2 -1S6D - 2SS8_HELAN -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
45 95.69100%-148 - C- -M045 - -
41 91.85100%-148 - C- -M041 - -
40 91.17100%-140 - C- -M040 - -
42 88.77100%-139 - C- -M042 - -