@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-29 )
AISCGQVSSALSPCISYARGNGANPTAACCSGVRSLAGAARSTADKQAACKCIKSAAGGLNAGKAAGIPSKCGVSVPYAISASVDCSKIR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
29 SP3 96.2771%-112 - C4 -1FK5 6.2 NLTP_MAIZE
11 HHSearch 89.8471%-118 - C4 -1AFH - NLTP_MAIZE -
16 HHSearch 86.1548%-122 - C4 -1BWO 3.5 NLTP1_WHEAT
12 HHSearch 86.0660%-119 - C4 -1T12 - NLTP1_TOBAC -
14 HHSearch 85.3653%-122 - C4 -2ALG 3.9 NLTP1_PRUPE
15 HHSearch 81.8642%-131 - C4 -1SIY - NLTP1_VIGRR -
25 HHSearch 63.4022%-108 - C4 -1SM7 - ? -
27 HHSearch 59.4133%-106 - C4 -1PSY - 2SS_RICCO -
24 HHSearch 55.1121%-124 - C4 -1BEA - ITRF_MAIZE -
3 Fugue 53.8133%-100 - C4 -1L6H - NLTPX_ORYSJ -
23 HHSearch 49.2720%-115 * C4 *1S6D - 2SS8_HELAN -
2 Fugue 48.1122% -72 - C4 -2RKN - DIRL1_ARATH -
17 HHSearch 46.9822% -82 - C4 -2RKN - DIRL1_ARATH -
22 HHSearch 44.0016% -95 - C4 -1B1U - IAAT_ELECO -
26 HHSearch 41.9817% -78 - C4 -3OB4 - ? -
4 Fugue 41.1614% -55 - C4 -1W2Q - CONG_ARAHY -
5 Fugue 39.9424% -56 - C4 -1PSY - 2SS_RICCO -
18 HHSearch 38.8437% -73 - C4 -1L6H - NLTPX_ORYSJ -
19 HHSearch 38.7629% -51 - C4 -1N89 - NLT2G_WHEAT -
8 Fugue 36.2617% -35 - C4 -1S6D - 2SS8_HELAN -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
33 96.47100%-128 - C- -M033 - -
37 96.10100%-131 - C- -M037 - -
39 95.42100%-119 - C- -M039 - -
36 94.87100%-128 - C- -M036 - -