@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-29 )
AISCGQVSSALSPCISYARGSGSSPPAACCSGVRSLAGAARSTADKQAACKCIKSAAGGLNAGKAAGIPSKCGVSIPYAISSSVDCSKIR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 SP3 97.5773%-115 - C4 -1FK5 6.2 NLTP_MAIZE
21 HHSearch 91.8573%-117 - C4 -1AFH - NLTP_MAIZE -
26 HHSearch 90.0048%-122 - C4 -1BWO 3.6 NLTP1_WHEAT
22 HHSearch 89.4760%-119 - C4 -1T12 - NLTP1_TOBAC -
25 HHSearch 85.8244%-127 - C4 -1SIY - NLTP1_VIGRR -
24 HHSearch 84.9053%-120 - C4 -2ALG 3.9 NLTP1_PRUPE
35 HHSearch 60.9423%-106 - C4 -1SM7 - ? -
36 HHSearch 60.3734%-105 - C4 -1PSY - 2SS_RICCO -
33 HHSearch 56.3121%-120 - C4 -1BEA - ITRF_MAIZE -
3 Fugue 53.6930% -98 - C4 -1L6H - NLTPX_ORYSJ -
13 SP3 52.2412% -67 - C4 -1A0P - ? -
34 HHSearch 49.9119%-114 - C4 -1S6D - 2SS8_HELAN -
27 HHSearch 49.4823% -80 - C4 -2RKN - DIRL1_ARATH -
12 SP3 48.8022% -76 - C4 -1L6H - NLTPX_ORYSJ -
2 Fugue 46.1022% -71 - C4 -2RKN - DIRL1_ARATH -
4 Fugue 45.2817% -47 - C4 -1W2Q - CONG_ARAHY -
32 HHSearch 45.1916% -95 - C4 -1B1U - IAAT_ELECO -
5 Fugue 43.6026% -49 - C4 -1PSY - 2SS_RICCO -
17 SP3 41.8221% -98 - C4 -1QPO - NADC_MYCTU -
28 HHSearch 39.9435% -77 - C4 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
39 99.30100%-125 - C- -M039 - -
41 97.50100%-132 - C- -M041 - -
40 95.71100%-127 - C- -M040 - -
43 94.79100%-117 - C- -M043 - -