@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-29 )
AISCGQVNSALSPCISYARGNSANPSAACCSGVRRLAGAVRSTTDKKTTCNCIKSAAGGLSAGKAADIPSKCSVSIPYAISPSLDCSTIR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
29 SP3 94.1965%-113 - C4 -1FK5 6.5 NLTP_MAIZE
11 HHSearch 90.9266%-114 - C4 -1AFH - NLTP_MAIZE -
16 HHSearch 88.2545%-116 - C4 -1BWO - NLTP1_WHEAT -
12 HHSearch 86.5952%-114 - C4 -1T12 - NLTP1_TOBAC -
14 HHSearch 84.2446%-121 - C4 -2ALG 2.4 NLTP1_PRUPE
15 HHSearch 82.9438%-122 - C4 -1SIY - NLTP1_VIGRR -
26 HHSearch 59.3722%-105 - C4 -1SM7 - ? -
27 HHSearch 58.9832% -88 - C4 -1PSY - 2SS_RICCO -
24 HHSearch 58.1520%-112 - C4 -1BEA - ITRF_MAIZE -
21 HHSearch 53.2522%-110 - C4 -1S6D - 2SS8_HELAN -
3 Fugue 50.1226% -93 - C4 -1L6H - NLTPX_ORYSJ -
2 Fugue 47.3622% -65 - C4 -2RKN - DIRL1_ARATH -
17 HHSearch 46.1722% -72 - C4 -2RKN - DIRL1_ARATH -
23 HHSearch 45.7215% -72 - C4 -1B1U - IAAT_ELECO -
5 Fugue 45.6722% -53 - C4 -1PSY - 2SS_RICCO -
18 HHSearch 39.8630% -73 - C4 -1L6H - NLTPX_ORYSJ -
19 HHSearch 38.8828% -41 - C4 -1N89 - NLT2G_WHEAT -
25 HHSearch 38.8715% -59 - C4 -3OB4 - ? -
4 Fugue 36.1313% -49 - C4 -1W2Q - CONG_ARAHY -
8 Fugue 35.4112% -39 - C4 -3UUN - DMD_HUMAN -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
33 95.68100%-129 - C- -M033 - -
38 94.96100%-113 - C- -M038 - -
37 94.58100%-118 - C- -M037 - -