@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-29 )
AISCGQVTSALSPCISYARGNGANPPAACCSGVRSLAGAARSTADKQAVCKCIKSAAGGLNAGKAAGIPLKCGVSVPYAISSSVDCSKIR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
29 SP3 96.9168%-117 - C6 -1FK5 6.2 NLTP_MAIZE
11 HHSearch 93.7869%-130 - C6 -1AFH - NLTP_MAIZE -
16 HHSearch 89.2647%-126 - C6 -1BWO 3.5 NLTP1_WHEAT
12 HHSearch 88.7658%-123 - C6 -1T12 - NLTP1_TOBAC -
15 HHSearch 84.7744%-137 - C6 -1SIY - NLTP1_VIGRR -
14 HHSearch 83.7749%-127 - C6 -2ALG 3.2 NLTP1_PRUPE
26 HHSearch 57.7623%-111 * C6 *1SM7 - ? -
27 HHSearch 57.5632%-107 - C6 -1PSY - 2SS_RICCO -
24 HHSearch 54.9521%-123 - C6 -1BEA - ITRF_MAIZE -
3 Fugue 53.0230%-115 - C6 -1L6H - NLTPX_ORYSJ -
2 Fugue 49.8922% -90 - C6 -2RKN - DIRL1_ARATH -
21 HHSearch 49.7620%-123 - C6 -1S6D - 2SS8_HELAN -
17 HHSearch 49.0922% -87 - C6 -2RKN - DIRL1_ARATH -
25 HHSearch 47.5517% -96 - C6 -3OB4 - ? -
4 Fugue 46.9116% -62 - C6 -1W2Q - CONG_ARAHY -
23 HHSearch 44.2216% -99 - C6 -1B1U - IAAT_ELECO -
5 Fugue 41.3022% -54 - C6 -1PSY - 2SS_RICCO -
19 HHSearch 38.1029% -57 - C6 -1N89 - NLT2G_WHEAT -
10 Fugue 37.9517% -48 - C6 -1S6D - 2SS8_HELAN -
18 HHSearch 36.3933% -82 - C6 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
33 98.76100%-134 - C- -M033 - -
37 94.31100%-133 - C- -M037 - -
36 93.68100%-131 - C- -M036 - -
39 93.63100%-131 - C- -M039 - -