@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-29 )
AISCGQVSSALSPCISYARGNGANPTAACCSGVRSLAGAARSTADKQAACKCIKSAAGGLNAGKAAGIPSKCGVSVPYAISATVDCSKIR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 SP3 96.3070%-112 - C4 -1FK5 6.2 NLTP_MAIZE
15 HHSearch 89.4470%-117 - C4 -1AFH - NLTP_MAIZE -
20 HHSearch 86.6948%-122 - C4 -1BWO 3.5 NLTP1_WHEAT
16 HHSearch 85.9958%-120 - C4 -1T12 - NLTP1_TOBAC -
18 HHSearch 85.4852%-122 - C4 -2ALG 2.4 NLTP1_PRUPE
19 HHSearch 83.4642%-131 - C4 -1SIY - NLTP1_VIGRR -
28 HHSearch 62.4724% -96 - C4 -1SM7 - ? -
31 HHSearch 58.7933%-102 - C4 -1PSY - 2SS_RICCO -
27 HHSearch 55.3921%-124 - C4 -1BEA - ITRF_MAIZE -
3 Fugue 52.1133%-100 - C4 -1L6H - NLTPX_ORYSJ -
29 HHSearch 49.6620%-115 - C4 -1S6D - 2SS8_HELAN -
2 Fugue 47.7022% -71 - C4 -2RKN - DIRL1_ARATH -
21 HHSearch 46.9022% -81 - C4 -2RKN - DIRL1_ARATH -
26 HHSearch 44.1616% -95 - C4 -1B1U - IAAT_ELECO -
30 HHSearch 42.4817% -83 - C4 -3OB4 - ? -
5 Fugue 42.2825% -63 - C4 -1PSY - 2SS_RICCO -
4 Fugue 41.0614% -55 - C4 -1W2Q - CONG_ARAHY -
22 HHSearch 38.6837% -73 - C4 -1L6H - NLTPX_ORYSJ -
23 HHSearch 36.1929% -51 - C4 -1N89 - NLT2G_WHEAT -
8 Fugue 34.9016% -37 - C4 -1S6D - 2SS8_HELAN -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
35 97.45100%-135 - C- -M035 - -
40 95.34100%-128 - C- -M040 - -
39 93.86100%-115 - C- -M039 - -
37 89.32100%-117 - C- -M037 - -