@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-29 )
AISCGQVNSALASCVSYAKGSGASPPGACCSGVRRLAGLARSTADKQAACRCIKSAAGGLNPGKAASIPSKCGVSIPYSISASVDCSKIH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
29 SP3 97.7966%-110 - C3 -1FK5 6.2 NLTP_MAIZE
12 HHSearch 94.9259%-121 - C3 -1T12 - NLTP1_TOBAC -
11 HHSearch 93.4767%-110 - C3 -1AFH - NLTP_MAIZE -
16 HHSearch 89.8449%-122 - C3 -1BWO 3.8 NLTP1_WHEAT
14 HHSearch 86.1453%-116 - C3 -2ALG 3.9 NLTP1_PRUPE
15 HHSearch 84.5845%-119 - C3 -1SIY - NLTP1_VIGRR -
27 HHSearch 61.8022%-104 * C3 *1SM7 - ? -
24 HHSearch 56.2823%-121 - C3 -1BEA - ITRF_MAIZE -
2 Fugue 54.5424% -76 - C3 -2RKN - DIRL1_ARATH -
26 HHSearch 54.0732% -85 - C3 -1PSY - 2SS_RICCO -
32 SP3 51.7816% -82 - C3 -1DIN - ? -
38 SP3 49.1313% -67 - C3 -1A0P - ? -
23 HHSearch 48.8919%-116 - C3 -1S6D - 2SS8_HELAN -
22 HHSearch 47.5016% -97 - C3 -1B1U - IAAT_ELECO -
17 HHSearch 45.2825% -76 - C3 -2RKN - DIRL1_ARATH -
3 Fugue 45.1531% -89 - C3 -1L6H - NLTPX_ORYSJ -
31 SP3 44.9715%-105 - C3 -1QPO - NADC_MYCTU -
30 SP3 40.7421% -63 - C3 -1L6H - NLTPX_ORYSJ -
25 HHSearch 39.9817% -65 - C3 -3OB4 - ? -
4 Fugue 37.8016% -41 - C3 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
45 41.05100% - - C- -M045 - -
43 41.05100% - - C- -M043 - -
39 41.05100% - - C- -M039 - -