@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-29 )
AISCGQVSSALTPCVAYAKGSGTSPSGACCSGVRKLAGLARSTADKQATCRCLKSVAGGLNPNKAAGIPSKCGVSVPYTISASVDCSKIH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 SP3 92.7363%-109 - C4 -1FK5 6.4 NLTP_MAIZE
21 HHSearch 90.6158%-121 - C4 -1T12 - NLTP1_TOBAC -
25 HHSearch 90.4751%-120 - C4 -1BWO 4.0 NLTP1_WHEAT
20 HHSearch 90.1063%-109 - C4 -1AFH - NLTP_MAIZE -
23 HHSearch 86.8454%-122 - C4 -2ALG 3.8 NLTP1_PRUPE
24 HHSearch 85.8444%-116 - C4 -1SIY - NLTP1_VIGRR -
33 HHSearch 61.7421%-124 - C4 -1BEA - ITRF_MAIZE -
19 SP3 58.7018%-125 - C4 -1HSS - IAA1_WHEAT -
34 HHSearch 58.4021%-107 - C4 -1SM7 - ? -
36 HHSearch 54.2829% -89 - C4 -1PSY - 2SS_RICCO -
3 Fugue 52.5530% -85 - C4 -1L6H - NLTPX_ORYSJ -
35 HHSearch 51.2220% -70 - C4 -3OB4 - ? -
31 HHSearch 48.5017%-115 - C4 -1S6D - 2SS8_HELAN -
16 SP3 47.6913% -54 - C4 -1A0P - ? -
12 SP3 47.2322% -67 - C4 -1L6H - NLTPX_ORYSJ -
2 Fugue 46.2427% -70 - C4 -2RKN - DIRL1_ARATH -
14 SP3 45.3415% -76 - C4 -1DIN - ? -
26 HHSearch 44.7126% -61 - C4 -2RKN - DIRL1_ARATH -
32 HHSearch 44.5315% -83 - C4 -1B1U - IAAT_ELECO -
13 SP3 43.6014%-103 - C4 -1QPO - NADC_MYCTU -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
41 97.95100%-119 - C- -M041 - -
39 97.59100%-123 - C- -M039 - -
45 91.81100%-121 - C- -M045 - -
43 90.20100%-122 - C- -M043 - -