@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
ALSCGQVDSKLAPCVAYVTGRASSISKECCSGVQGLNGMARSSSDRKIACRCLKSLATSIKSINMGKVSGVPGKCGVSVPFPISMSTNCDTVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




22 HHSearch 94.3051%-121 - C2 -1T12 - NLTP1_TOBAC -
11 SP3 88.7450%-123 - C2 -1FK5 5.6 NLTP_MAIZE
23 HHSearch 88.0448%-129 - C2 -2ALG 3.9 NLTP1_PRUPE
26 HHSearch 87.9244%-124 - C2 -1BWO 4.8 NLTP1_WHEAT
21 HHSearch 85.0951%-118 - C2 -1AFH - NLTP_MAIZE -
25 HHSearch 81.6838%-115 - C2 -1SIY - NLTP1_VIGRR -
35 HHSearch 64.7620%-138 - C2 -1SM7 - ? -
30 HHSearch 59.0619%-152 - C2 -1BEA - ITRF_MAIZE -
10 Fugue 53.7719% -91 - C2 -1S6D - 2SS8_HELAN -
27 HHSearch 52.5825% -81 - C2 -2RKN - DIRL1_ARATH -
2 Fugue 51.4124% -67 - C2 -2RKN - DIRL1_ARATH -
37 HHSearch 50.1618% -93 - C2 -1PSY - 2SS_RICCO -
36 HHSearch 49.0716% -98 - C2 -3OB4 - ? -
33 HHSearch 47.9115%-120 - C2 -1B1U - IAAT_ELECO -
34 HHSearch 47.4218%-103 - C2 -1S6D - 2SS8_HELAN -
14 SP3 47.3711% -92 - C2 -1QPO - NADC_MYCTU -
7 Fugue 46.7522% -76 - C2 -1L6H - NLTPX_ORYSJ -
6 Fugue 45.899% -72 - C2 -3D7J - ? -
8 Fugue 45.2819% -68 - C2 -4HR1 - ? -
4 Fugue 44.6718% -29 - C2 -1PSY - 2SS_RICCO -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




41 98.14100%-147 - C- -M041 - -
45 94.75100%-133 - C- -M045 - -
44 94.57100%-133 - C- -M044 - -
42 91.99100%-130 - C- -M042 - -
40 91.63100%-139 - C- -M040 - -