@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
LSCGQVDSKLAPCVSYVTGKAPSISKECCSGVQGLNGLARSSPDRKIACRCLKSLATSIKSINMDKVSGVPGKCGVSVPFPISMSTNCNNVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 HHSearch 89.7348%-119 - C5 -1T12 - NLTP1_TOBAC -
13 HHSearch 88.4649%-128 - C5 -2ALG 3.9 NLTP1_PRUPE
28 SP3 85.4148%-123 * C5 *1FK5 5.7 NLTP_MAIZE
10 HHSearch 83.2449%-119 - C5 -1AFH - NLTP_MAIZE -
15 HHSearch 82.7547%-123 - C5 -1BWO 4.9 NLTP1_WHEAT
14 HHSearch 81.1440%-119 - C5 -1SIY - NLTP1_VIGRR -
23 HHSearch 66.0522%-133 - C5 -1SM7 - ? -
19 HHSearch 63.9320%-156 - C5 -1BEA - ITRF_MAIZE -
16 HHSearch 48.4427% -97 - C5 -2RKN - DIRL1_ARATH -
6 Fugue 47.7218% -82 - C5 -1S6D - 2SS8_HELAN -
24 HHSearch 47.5118% -96 - C5 -1PSY - 2SS_RICCO -
22 HHSearch 46.5015%-107 - C5 -1B1U - IAAT_ELECO -
25 HHSearch 46.2916%-102 - C5 -3OB4 - ? -
2 Fugue 41.5725% -59 - C5 -2RKN - DIRL1_ARATH -
17 HHSearch 40.1524% -77 - C5 -1L6H - NLTPX_ORYSJ -
3 Fugue 39.3723% -62 - C5 -1L6H - NLTPX_ORYSJ -
7 Fugue 37.5018% -28 - C5 -1PSY - 2SS_RICCO -
18 HHSearch 35.8528% -43 - C5 -1N89 - NLT2G_WHEAT -
5 Fugue 31.4410% -29 - C5 -1W2Q - CONG_ARAHY -
21 HHSearch 31.4218%-114 - C5 -2DS2 - ? -


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
38 94.40100%-134 - C- -M038 - -
32 91.11100%-139 - C- -M032 - -