@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
ISCSTVYSTLMPCPQYVQQGGSPARGCCTGIQNLLAEANNSPDRRTICGCLKNVANGASGGPYITRAAALPSKCNVALPYKISPSVDCNSIH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
22 HHSearch 94.0444%-127 - C3 -1T12 - NLTP1_TOBAC -
11 SP3 89.5846%-134 - C3 -1FK5 - NLTP_MAIZE -
24 HHSearch 88.3143%-134 - C3 -1SIY - NLTP1_VIGRR -
23 HHSearch 88.0147%-129 - C3 -1AFH - NLTP_MAIZE -
21 HHSearch 87.6544%-138 - C3 -2ALG 2.8 NLTP1_PRUPE
26 HHSearch 85.0541%-135 - C3 -1BWO 4.5 NLTP1_WHEAT
38 HHSearch 69.4430%-131 - C3 -1SM7 - ? -
35 HHSearch 64.8128%-120 - C3 -1BEA - ITRF_MAIZE -
40 HHSearch 64.4920%-136 * C3 *1HSS - IAA1_WHEAT -
39 HHSearch 63.6921%-122 - C3 -1W2Q - CONG_ARAHY -
31 HHSearch 60.2724%-148 - C3 -1S6D - 2SS8_HELAN -
32 HHSearch 56.6724%-105 - C3 -2LVF - ? -
4 Fugue 56.4121% -77 - C3 -1S6D - 2SS8_HELAN -
27 HHSearch 55.9029%-100 - C3 -2RKN - DIRL1_ARATH -
34 HHSearch 55.6120%-119 - C3 -1B1U - IAAT_ELECO -
2 Fugue 52.5330%-101 - C3 -2RKN - DIRL1_ARATH -
36 HHSearch 50.4620%-117 - C3 -3OB4 - ? -
37 HHSearch 48.9023% -59 - C3 -1PSY - 2SS_RICCO -
6 Fugue 48.6617% -91 - C3 -2FWT - ? -
9 Fugue 47.5617% -42 - C3 -1PSY - 2SS_RICCO -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
44 48.77100% - - C- -M044 - -
46 40.08100% 5 - C- -M046 - -
42 39.71100% 1 - C- -M042 - -
43 39.14100% 10 - C- -M043 - -