@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
ISCSTVYSTLMPCLQYVQQGGSPARGCCTGIQNLLAEANNSPDRRTICGCLKNVANGASGGPYITRAAALPSKCNVALPYKISPSVDCNSIH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
22 HHSearch 93.8946%-136 - C3 -1T12 - NLTP1_TOBAC -
11 SP3 93.0546%-139 - C3 -1FK5 - NLTP_MAIZE -
23 HHSearch 90.0147%-132 - C3 -1AFH - NLTP_MAIZE -
24 HHSearch 89.1443%-138 - C3 -1SIY - NLTP1_VIGRR -
21 HHSearch 87.7344%-143 - C3 -2ALG 2.8 NLTP1_PRUPE
26 HHSearch 86.5342%-137 - C3 -1BWO 4.8 NLTP1_WHEAT
37 HHSearch 69.9730%-143 - C3 -1SM7 - ? -
39 HHSearch 66.9621%-137 - C3 -1W2Q - CONG_ARAHY -
36 HHSearch 65.9328%-137 - C3 -1BEA - ITRF_MAIZE -
31 HHSearch 63.9224%-164 - C3 -1S6D - 2SS8_HELAN -
40 HHSearch 63.1020%-149 * C3 *1HSS - IAA1_WHEAT -
4 Fugue 60.0021% -90 - C3 -1S6D - 2SS8_HELAN -
27 HHSearch 58.2329%-105 - C3 -2RKN - DIRL1_ARATH -
32 HHSearch 56.6424%-115 - C3 -2LVF - ? -
34 HHSearch 55.5420%-132 - C3 -1B1U - IAAT_ELECO -
2 Fugue 55.4630%-104 - C3 -2RKN - DIRL1_ARATH -
8 Fugue 51.1017% -54 - C3 -1PSY - 2SS_RICCO -
38 HHSearch 50.0124% -76 - C3 -1PSY - 2SS_RICCO -
35 HHSearch 48.0820%-115 - C3 -3OB4 - ? -
9 Fugue 47.8915% -68 - C3 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
49 44.85100% - - C- -M049 - -
47 36.87100% 9 - C- -M047 - -
43 35.09100% 11 - C- -M043 - -
46 32.83100% 14 - C- -M046 - -