@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
ISCSTVYSTLMPCLQYVQQGGSPARGCCTGIQNLLAEANNSPDRRTICGCLKNVANGASGGPYITRADALPSKCNVALPYKISPSVDCNSNH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
10 SP3 91.2945%-127 - C2 -1FK5 - NLTP_MAIZE -
21 HHSearch 90.9644%-125 - C2 -1T12 - NLTP1_TOBAC -
22 HHSearch 88.8146%-118 - C2 -1AFH - NLTP_MAIZE -
24 HHSearch 86.8842%-128 - C2 -1SIY - NLTP1_VIGRR -
25 HHSearch 86.3442%-122 - C2 -1BWO 4.8 NLTP1_WHEAT
20 HHSearch 83.9343%-129 - C2 -2ALG 2.8 NLTP1_PRUPE
36 HHSearch 69.8430%-139 - C2 -1SM7 - ? -
35 HHSearch 66.3027%-131 - C2 -1BEA - ITRF_MAIZE -
38 HHSearch 65.3221%-132 - C2 -1W2Q - CONG_ARAHY -
31 HHSearch 61.2923%-153 - C2 -1S6D - 2SS8_HELAN -
40 HHSearch 60.3819%-142 * C2 *1HSS - IAA1_WHEAT -
4 Fugue 55.4721% -85 - C2 -1S6D - 2SS8_HELAN -
26 HHSearch 55.0429% -96 - C2 -2RKN - DIRL1_ARATH -
30 HHSearch 55.0024%-108 - C2 -2LVF - ? -
2 Fugue 54.8830% -93 - C2 -2RKN - DIRL1_ARATH -
33 HHSearch 51.7420%-110 - C2 -1B1U - IAAT_ELECO -
37 HHSearch 50.0723% -70 - C2 -1PSY - 2SS_RICCO -
18 SP3 49.9415%-128 - C2 -1HSS - IAA1_WHEAT -
34 HHSearch 45.5220%-109 - C2 -3OB4 - ? -
7 Fugue 43.8317% -44 - C2 -1PSY - 2SS_RICCO -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
45 37.68100% 2 - C- -M045 - -
42 36.75100% 6 - C- -M042 - -
46 34.23100% 6 - C- -M046 - -