@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
AVANCGQVVSYLAPCISYAMGRVSVPGGGCCSGVRGLNAAAATPADRKATCTCLKQQASGMGGIKPDLVAGIPSKCGVNIPYAISPRTDCSKVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
10 SP3 92.5259%-115 - C2 -1FK5 5.8 NLTP_MAIZE
20 HHSearch 92.1560%-113 - C2 -1AFH - NLTP_MAIZE -
21 HHSearch 91.4554%-122 - C2 -1T12 - NLTP1_TOBAC -
25 HHSearch 85.4446%-114 - C2 -1BWO - NLTP1_WHEAT -
24 HHSearch 84.9043%-123 - C2 -1SIY - NLTP1_VIGRR -
23 HHSearch 83.4447%-116 - C2 -2ALG 2.5 NLTP1_PRUPE
7 Fugue 56.8820%-129 - C2 -1S6D - 2SS8_HELAN -
4 Fugue 53.3520% -66 - C2 -1PSY - 2SS_RICCO -
33 HHSearch 53.0319%-139 - C2 -1BEA - ITRF_MAIZE -
35 HHSearch 51.8921%-126 - C2 -1SM7 - ? -
19 SP3 51.0819%-103 - C2 -1QPO - NADC_MYCTU -
9 Fugue 50.6624% -84 - C2 -3U2A - ? -
18 SP3 49.0917%-116 - C2 -1HSS - IAA1_WHEAT -
17 SP3 48.6819%-103 - C2 -1QPO - NADC_MYCTU -
6 Fugue 48.1826% -97 - C2 -1L6H - NLTPX_ORYSJ -
2 Fugue 46.8725% -83 - C2 -2RKN - DIRL1_ARATH -
26 HHSearch 46.3422% -91 - C2 -2RKN - DIRL1_ARATH -
36 HHSearch 45.9421%-103 - C2 -1PSY - 2SS_RICCO -
5 Fugue 45.2513% -76 - C2 -1W2Q - CONG_ARAHY -
34 HHSearch 44.9020% -66 - C2 -3OB4 - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
40 96.35100%-128 - C- -M040 - -
41 94.95100%-141 - C- -M041 - -
38 43.23100% 3 - C- -M038 - -
45 42.56100% 7 - C- -M045 - -