@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
AISCGQVNSALGPCLTYARGGAGPSAVCCSGVKRLAAATQTTVDRRAACNCLKMAIGRMSGFKAGNIASIPSKCGVSVPYAVGASVDCSRVS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
28 SP3 93.4466%-133 - C2 -1FK5 5.6 NLTP_MAIZE
12 HHSearch 93.4266%-130 - C2 -1AFH - NLTP_MAIZE -
11 HHSearch 86.1546%-137 - C2 -2ALG - NLTP1_PRUPE -
13 HHSearch 84.7652%-129 - C2 -1T12 - NLTP1_TOBAC -
16 HHSearch 82.3148%-142 - C2 -1BWO - NLTP1_WHEAT -
15 HHSearch 78.1638%-143 - C2 -1SIY - NLTP1_VIGRR -
33 SP3 59.0621%-143 - C2 -1HSS - IAA1_WHEAT -
25 HHSearch 54.9223%-152 - C2 -1SM7 - ? -
23 HHSearch 52.7717%-170 - C2 -1BEA - ITRF_MAIZE -
26 HHSearch 52.2026%-116 - C2 -1PSY - 2SS_RICCO -
7 Fugue 51.2424% -99 - C2 -1PSY - 2SS_RICCO -
4 Fugue 49.8724%-103 - C2 -1L6H - NLTPX_ORYSJ -
10 Fugue 47.4620%-109 - C2 -1S6D - 2SS8_HELAN -
22 HHSearch 47.2014%-124 - C2 -1B1U - IAAT_ELECO -
24 HHSearch 46.3420%-116 - C2 -3OB4 - ? -
31 SP3 46.0721% -89 - C2 -1L6H - NLTPX_ORYSJ -
2 Fugue 46.0620%-103 - C2 -2RKN - DIRL1_ARATH -
18 HHSearch 45.0030% -85 - C2 -1L6H - NLTPX_ORYSJ -
17 HHSearch 42.5521%-106 - C2 -2RKN - DIRL1_ARATH -
9 Fugue 39.0919% -72 - C2 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
44 96.50100%-152 - C- -M044 - -
38 93.08100%-156 - C- -M038 - -
45 92.29100%-134 - C- -M045 - -
42 89.75100%-149 - C- -M042 - -