@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
AISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 SP3 91.6080%-121 - C2 -1FK5 5.7 NLTP_MAIZE
26 HHSearch 86.1759%-123 - C2 -1BWO 6.9 NLTP1_WHEAT
23 HHSearch 86.1580%-119 - C2 -1AFH - NLTP_MAIZE -
21 HHSearch 80.0853%-125 - C2 -2ALG 4.0 NLTP1_PRUPE
22 HHSearch 79.6258%-119 - C2 -1T12 - NLTP1_TOBAC -
25 HHSearch 73.6844%-117 - C2 -1SIY - NLTP1_VIGRR -
38 HHSearch 55.8927%-136 - C2 -1HSS - IAA1_WHEAT -
33 HHSearch 54.7919%-148 - C2 -1BEA - ITRF_MAIZE -
16 SP3 51.3521%-131 - C2 -1HSS - IAA1_WHEAT -
34 HHSearch 51.0225%-122 - C2 -1SM7 - ? -
36 HHSearch 46.6229% -93 - C2 -1PSY - 2SS_RICCO -
3 Fugue 45.5328%-101 - C2 -1L6H - NLTPX_ORYSJ -
2 Fugue 43.7021% -93 - C2 -2RKN - DIRL1_ARATH -
4 Fugue 43.5124% -46 - C2 -1PSY - 2SS_RICCO -
7 Fugue 43.2317% -75 - C2 -1S6D - 2SS8_HELAN -
35 HHSearch 42.4820% -80 - C2 -3OB4 - ? -
32 HHSearch 42.2914%-106 - C2 -1B1U - IAAT_ELECO -
28 HHSearch 41.9636% -88 - C2 -1L6H - NLTPX_ORYSJ -
13 SP3 40.3622% -84 - C2 -1L6H - NLTPX_ORYSJ -
27 HHSearch 39.1123% -83 - C2 -2RKN - DIRL1_ARATH -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]
43 91.38100%-130 - C- -M043 - -
42 90.60100%-141 - C- -M042 - -
45 89.76100%-130 - C- -M045 - -