@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
ALTCSTVYNELMPCLGYVQSGGAVPRACCSGIKTLVSRARATPDRRAACACLKTVAAAAAGGPYLGRAAGLPGRCGVQPPFKIDPNVNCNAV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
21 HHSearch 95.3150%-126 - C2 -1T12 - NLTP1_TOBAC -
20 HHSearch 94.0651%-140 - C2 -2ALG 4.0 NLTP1_PRUPE
24 HHSearch 88.1946%-131 - C2 -1SIY - NLTP1_VIGRR -
10 SP3 86.2541%-137 - C2 -1FK5 5.4 NLTP_MAIZE
25 HHSearch 84.3038%-140 - C2 -1BWO - NLTP1_WHEAT -
22 HHSearch 82.8142%-119 - C2 -1AFH - NLTP_MAIZE -
37 HHSearch 66.7417%-134 - C2 -1W2Q - CONG_ARAHY -
39 HHSearch 61.9718%-153 - C2 -1HSS - IAA1_WHEAT -
35 HHSearch 61.6428%-126 - C2 -1BEA - ITRF_MAIZE -
3 Fugue 59.5020% -95 - C2 -1PSY - 2SS_RICCO -
36 HHSearch 58.9322%-148 * C2 *1SM7 - ? -
6 Fugue 56.3220%-124 - C2 -1S6D - 2SS8_HELAN -
12 SP3 55.0817%-137 - C2 -1HSS - IAA1_WHEAT -
38 HHSearch 54.9521%-127 - C2 -2LVF - ? -
30 HHSearch 52.4621%-135 - C2 -1S6D - 2SS8_HELAN -
33 HHSearch 52.3521% -95 - C2 -1PSY - 2SS_RICCO -
32 HHSearch 51.7217%-125 - C2 -1B1U - IAAT_ELECO -
2 Fugue 51.4224%-115 - C2 -2RKN - DIRL1_ARATH -
7 Fugue 48.7512% -81 - C2 -1W2Q - CONG_ARAHY -
26 HHSearch 46.1721%-111 - C2 -2RKN - DIRL1_ARATH -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
40 99.21100%-149 - C- -M040 - -
41 98.44100%-150 - C- -M041 - -
44 95.42100%-149 - C- -M044 - -
45 94.97100%-146 - C- -M045 - -
47 42.39100% -15 - C- -M047 - -