@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
AISCSAVYNTLMPCLPYVQAGGTVPRACCGGIQSLLAAANNTPDRRTICGCLKNVANGASGGPYITRAAALPSKCNVSLPYKISTSVNCNAIN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
23 HHSearch 95.4446%-155 - C4 -1SIY - NLTP1_VIGRR -
11 SP3 94.8748%-154 - C4 -1FK5 5.1 NLTP_MAIZE
19 HHSearch 93.6849%-162 - C4 -2ALG 4.2 NLTP1_PRUPE
21 HHSearch 91.0249%-140 - C4 -1AFH - NLTP_MAIZE -
20 HHSearch 89.3644%-143 - C4 -1T12 - NLTP1_TOBAC -
24 HHSearch 85.8138%-157 - C4 -1BWO 5.4 NLTP1_WHEAT
36 HHSearch 67.3628%-145 - C4 -1BEA - ITRF_MAIZE -
39 HHSearch 63.1023%-157 * C4 *1HSS - IAA1_WHEAT -
35 HHSearch 61.3425%-149 - C4 -1SM7 - ? -
37 HHSearch 59.8718%-127 - C4 -1W2Q - CONG_ARAHY -
32 HHSearch 57.2520%-140 - C4 -1B1U - IAAT_ELECO -
29 HHSearch 55.8426%-122 - C4 -2LVF - ? -
30 HHSearch 52.5823%-149 - C4 -1S6D - 2SS8_HELAN -
2 Fugue 49.6025%-112 - C4 -2RKN - DIRL1_ARATH -
14 SP3 49.5317%-139 - C4 -1HSS - IAA1_WHEAT -
25 HHSearch 48.8225%-109 - C4 -2RKN - DIRL1_ARATH -
3 Fugue 46.5520% -99 - C4 -1S6D - 2SS8_HELAN -
33 HHSearch 44.8020% -76 - C4 -1PSY - 2SS_RICCO -
4 Fugue 44.5515% -53 - C4 -1PSY - 2SS_RICCO -
7 Fugue 43.6614% -76 - C4 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
46 99.50100%-174 - C- -M046 - -
43 99.47100%-171 - C- -M043 - -
42 98.54100%-169 - C- -M042 - -
47 94.91100%-165 - C- -M047 - -
40 40.12100% -4 - C- -M040 - -