@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
VTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRVH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
17 HHSearch 95.1656%-135 - C4 -1T12 - NLTP1_TOBAC -
10 SP3 94.5659%-122 - C4 -1FK5 5.9 NLTP_MAIZE
16 HHSearch 92.4460%-125 - C4 -1AFH - NLTP_MAIZE -
21 HHSearch 89.2447%-120 - C4 -1BWO - NLTP1_WHEAT -
19 HHSearch 88.4652%-123 - C4 -2ALG 3.7 NLTP1_PRUPE
20 HHSearch 87.7743%-129 - C4 -1SIY - NLTP1_VIGRR -
29 HHSearch 52.9018%-143 - C4 -1BEA - ITRF_MAIZE -
30 HHSearch 52.2019%-117 - C4 -1SM7 - ? -
32 HHSearch 50.3323%-106 - C4 -1PSY - 2SS_RICCO -
9 Fugue 48.9522% -75 - C4 -1PSY - 2SS_RICCO -
2 Fugue 47.7122% -97 - C4 -2RKN - DIRL1_ARATH -
3 Fugue 47.3525%-112 - C4 -1L6H - NLTPX_ORYSJ -
7 Fugue 45.5311%-105 - C4 -3ZCO - -
26 HHSearch 45.4818%-116 - C4 -1S6D - 2SS8_HELAN -
23 HHSearch 45.4128%-110 - C4 -1L6H - NLTPX_ORYSJ -
22 HHSearch 45.2321% -87 - C4 -2RKN - DIRL1_ARATH -
31 HHSearch 44.6620% -56 - C4 -3OB4 - ? -
5 Fugue 42.8422% -79 - C4 -1W2Q - CONG_ARAHY -
28 HHSearch 42.7915% -91 - C4 -1B1U - IAAT_ELECO -
24 HHSearch 39.2726% -91 - C4 -1N89 - NLT2G_WHEAT -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
40 46.52100% - - C- -M040 - -
38 46.52100% - - C- -M038 - -
34 46.52100% - - C- -M034 - -