@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASSTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
29 SP3 92.0375%-116 - C2 -1FK5 6.2 NLTP_MAIZE
16 HHSearch 91.0662%-120 - C2 -1BWO 6.5 NLTP1_WHEAT
12 HHSearch 88.4576%-114 - C2 -1AFH - NLTP_MAIZE -
14 HHSearch 83.2554%-106 - C2 -1T12 - NLTP1_TOBAC -
11 HHSearch 82.2152%-119 - C2 -2ALG 3.8 NLTP1_PRUPE
13 HHSearch 76.4541%-115 - C2 -1SIY - NLTP1_VIGRR -
25 HHSearch 62.0324%-118 - C2 -1SM7 - ? -
23 HHSearch 56.4321%-123 - C2 -1BEA - ITRF_MAIZE -
36 SP3 53.6521%-109 - C2 -1HSS - IAA1_WHEAT -
33 SP3 53.4220%-111 - C2 -1QPO - NADC_MYCTU -
27 HHSearch 50.8229% -86 - C2 -1PSY - 2SS_RICCO -
2 Fugue 50.6023% -79 - C2 -2RKN - DIRL1_ARATH -
3 Fugue 49.6830%-101 - C2 -1L6H - NLTPX_ORYSJ -
22 HHSearch 47.7416% -95 - C2 -1B1U - IAAT_ELECO -
17 HHSearch 46.5321% -70 - C2 -2RKN - DIRL1_ARATH -
26 HHSearch 43.8915% -88 - C2 -1S6D - 2SS8_HELAN -
18 HHSearch 43.7837% -82 - C2 -1L6H - NLTPX_ORYSJ -
35 SP3 42.7513% -81 - C2 -1O4U - ? -
31 SP3 42.1024% -82 - C2 -1L6H - NLTPX_ORYSJ -
8 Fugue 38.4017% -63 - C2 -1S6D - 2SS8_HELAN -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
39 97.29100%-122 - C- -M039 - -
43 96.52100%-118 - C- -M043 - -
46 96.02100%-122 - C- -M046 - -
45 95.94100%-116 - C- -M045 - -