@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
AITCGQVGSAIAPCISYVTGRSGLTQGCCNGVKGLNNAARTTADRQAACRCLKSLAGSIKSLNLGTVAGVPGKCGVNVGFPISLSTDCNKVS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



FMT_A_3(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 SP3 92.2759%-140 - C1 -1FK5 5.7 NLTP_MAIZE
22 HHSearch 88.5153%-149 - C1 -2ALG 3.8 NLTP1_PRUPE
23 HHSearch 88.3558%-142 - C1 -1T12 - NLTP1_TOBAC -
21 HHSearch 85.8060%-140 - C1 -1AFH - NLTP_MAIZE -
26 HHSearch 83.7150%-149 - C1 -1BWO 5.8 NLTP1_WHEAT
25 HHSearch 81.0345%-139 - C1 -1SIY - NLTP1_VIGRR -
33 HHSearch 59.4024%-177 - C1 -1BEA - ITRF_MAIZE -
35 HHSearch 54.0821%-129 - C1 -1SM7 - ? -
14 SP3 53.4017%-153 - C1 -1HSS - IAA1_WHEAT -
36 HHSearch 48.0523%-106 - C1 -1PSY - 2SS_RICCO -
27 HHSearch 45.1321%-111 - C1 -2RKN - DIRL1_ARATH -
32 HHSearch 43.5116%-143 - C1 -1B1U - IAAT_ELECO -
2 Fugue 43.1420% -94 - C1 -2RKN - DIRL1_ARATH -
37 HHSearch 41.2216%-104 - C1 -3OB4 - ? -
34 HHSearch 41.1218%-141 - C1 -1S6D - 2SS8_HELAN -
19 SP3 38.0815%-101 - C1 -1QPO - NADC_MYCTU -
4 Fugue 36.1817% -91 - C1 -1L6H - NLTPX_ORYSJ -
12 SP3 35.2014% -97 - C1 -1L6H - NLTPX_ORYSJ -
28 HHSearch 33.4818% -85 - C1 -1L6H - NLTPX_ORYSJ -
29 HHSearch 33.0520% -71 - C1 -1N89 - NLT2G_WHEAT -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



FMT_A_3(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
45 93.73100%-156 - C- -M045 - -
39 93.07100%-156 - C- -M039 - -
40 90.90100%-161 - C- -M040 - -
44 88.52100%-156 - C- -M044 - -