@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-30 )
ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 SP3 92.5876%-115 - C2 -1FK5 6.2 NLTP_MAIZE
26 HHSearch 90.1461%-119 - C2 -1BWO 6.5 NLTP1_WHEAT
22 HHSearch 89.2677%-115 - C2 -1AFH - NLTP_MAIZE -
21 HHSearch 82.3853%-119 - C2 -2ALG 3.8 NLTP1_PRUPE
24 HHSearch 81.9756%-105 - C2 -1T12 - NLTP1_TOBAC -
23 HHSearch 77.2142%-114 - C2 -1SIY - NLTP1_VIGRR -
35 HHSearch 61.1524%-117 - C2 -1SM7 - ? -
33 HHSearch 55.8121%-123 - C2 -1BEA - ITRF_MAIZE -
18 SP3 53.0321%-109 - C2 -1HSS - IAA1_WHEAT -
36 HHSearch 50.2427% -83 - C2 -1PSY - 2SS_RICCO -
15 SP3 50.2120%-109 - C2 -1QPO - NADC_MYCTU -
3 Fugue 49.1930%-101 - C2 -1L6H - NLTPX_ORYSJ -
2 Fugue 49.0823% -79 - C2 -2RKN - DIRL1_ARATH -
32 HHSearch 46.9816% -95 - C2 -1B1U - IAAT_ELECO -
27 HHSearch 44.4220% -78 - C2 -2RKN - DIRL1_ARATH -
37 HHSearch 43.2615% -87 - C2 -1S6D - 2SS8_HELAN -
17 SP3 42.0612% -81 - C2 -1O4U - ? -
28 HHSearch 41.9536% -88 - C2 -1L6H - NLTPX_ORYSJ -
13 SP3 41.3224% -82 - C2 -1L6H - NLTPX_ORYSJ -
8 Fugue 38.0917% -63 - C2 -1S6D - 2SS8_HELAN -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
44 98.69100%-129 - C- -M044 - -
39 95.18100%-130 - C- -M039 - -
45 91.61100%-129 - C- -M045 - -