@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-01 )
ALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
30 SP3 92.5755%-127 - C2 -1FK5 5.8 NLTP_MAIZE
11 HHSearch 91.7255%-126 - C2 -2ALG 3.6 NLTP1_PRUPE
12 HHSearch 90.3256%-113 - C2 -1T12 - NLTP1_TOBAC -
13 HHSearch 86.9157%-113 - C2 -1AFH - NLTP_MAIZE -
15 HHSearch 86.4453%-129 - C2 -1SIY - NLTP1_VIGRR -
16 HHSearch 86.3546%-134 - C2 -1BWO 6.6 NLTP1_WHEAT
29 HHSearch 65.4820%-165 - C2 -1HSS - IAA1_WHEAT -
26 HHSearch 65.4422%-144 - C2 -1SM7 - ? -
23 HHSearch 62.9820%-155 - C2 -1BEA - ITRF_MAIZE -
34 SP3 59.4617%-137 * C2 *1HSS - IAA1_WHEAT -
22 HHSearch 58.7931% -99 - C2 -1PSY - 2SS_RICCO -
6 Fugue 56.6725% -78 - C2 -1PSY - 2SS_RICCO -
17 HHSearch 53.3521%-122 - C2 -2RKN - DIRL1_ARATH -
2 Fugue 52.2024%-100 - C2 -2RKN - DIRL1_ARATH -
21 HHSearch 50.6618%-148 - C2 -1B1U - IAAT_ELECO -
28 HHSearch 48.6323%-108 - C2 -1S6D - 2SS8_HELAN -
10 Fugue 45.0812% -84 - C2 -4HLB - ? -
19 HHSearch 44.1127% -75 - C2 -1N89 - NLT2G_WHEAT -
3 Fugue 43.7028% -57 - C2 -1L6H - NLTPX_ORYSJ -
31 SP3 42.9421% -59 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
46 92.90100%-133 - C- -M046 - -
40 44.63100% -1 - C- -M040 - -
45 41.08100% 15 - C- -M045 - -
44 39.41100% 5 - C- -M044 - -