@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-01 )
AVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMT_A_4(1FK5)
NLTP_MAIZE
[Raw transfer]



FMT_A_3(1FK5)
NLTP_MAIZE
[Raw transfer]
23 HHSearch 94.1745%-123 - C2 -1T12 - NLTP1_TOBAC -
11 SP3 92.6440%-132 - C2 -1FK5 3.4 NLTP_MAIZE
26 HHSearch 91.0739%-129 - C2 -1BWO - NLTP1_WHEAT -
22 HHSearch 88.9641%-123 - C2 -1AFH - NLTP_MAIZE -
25 HHSearch 88.5141%-125 - C2 -1SIY - NLTP1_VIGRR -
21 HHSearch 87.9741%-128 - C2 -2ALG - NLTP1_PRUPE -
36 HHSearch 69.3429%-156 - C2 -1SM7 - ? -
5 Fugue 64.4022%-122 - C2 -1S6D - 2SS8_HELAN -
37 HHSearch 61.2923%-137 - C2 -1BEA - ITRF_MAIZE -
35 HHSearch 58.2729% -92 - C2 -1PSY - 2SS_RICCO -
27 HHSearch 58.2623%-112 - C2 -2RKN - DIRL1_ARATH -
3 Fugue 58.1621% -55 - C2 -1PSY - 2SS_RICCO -
38 HHSearch 56.9519%-113 - C2 -1W2Q - CONG_ARAHY -
40 HHSearch 54.6917%-160 - C2 -1HSS - IAA1_WHEAT -
33 HHSearch 53.8421%-120 - C2 -1B1U - IAAT_ELECO -
39 HHSearch 51.0522%-106 - C2 -2LVF - ? -
30 HHSearch 50.1426%-131 - C2 -1S6D - 2SS8_HELAN -
2 Fugue 48.5922% -70 - C2 -2RKN - DIRL1_ARATH -
8 Fugue 47.1217% -48 - C2 -2OBD - CETP_HUMAN -
34 HHSearch 46.9623%-103 - C2 -3OB4 - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMT_A_4(1FK5)
NLTP_MAIZE
[Raw transfer]



FMT_A_3(1FK5)
NLTP_MAIZE
[Raw transfer]
43 96.60100%-150 - C- -M043 - -
42 96.32100%-139 - C- -M042 - -
47 94.97100%-154 - C- -M047 - -
49 31.78100% 19 - C- -M049 - -