@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-01 )
AITCGTVASSLSPCLGYLSKGGVVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSAAKGVNPSLASGLPGKCGVSIPYPISTSTNCATIK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




23 HHSearch 95.7258%-127 - C5 -1SIY - NLTP1_VIGRR -
19 HHSearch 94.9163%-125 - C5 -2ALG 3.7 NLTP1_PRUPE
20 HHSearch 93.1757%-127 - C5 -1T12 - NLTP1_TOBAC -
21 HHSearch 90.0652%-110 - C5 -1AFH - NLTP_MAIZE -
11 SP3 89.4051%-127 - C5 -1FK5 5.4 NLTP_MAIZE
24 HHSearch 87.6243%-127 - C5 -1BWO 3.5 NLTP1_WHEAT
35 HHSearch 63.9127%-121 - C5 -1SM7 - ? -
2 Fugue 63.0334% -73 - C5 -2RKN - DIRL1_ARATH -
6 Fugue 57.2522% -82 - C5 -1PSY - 2SS_RICCO -
32 HHSearch 56.5320%-114 - C5 -1BEA - ITRF_MAIZE -
34 HHSearch 55.6325% -82 - C5 -1PSY - 2SS_RICCO -
25 HHSearch 55.5132% -85 - C5 -2RKN - DIRL1_ARATH -
30 HHSearch 53.5926%-104 - C5 -1S6D - 2SS8_HELAN -
31 HHSearch 46.0518% -99 - C5 -1B1U - IAAT_ELECO -
5 Fugue 44.2423% -77 - C5 -1L6H - NLTPX_ORYSJ -
26 HHSearch 42.8028% -72 - C5 -1L6H - NLTPX_ORYSJ -
7 Fugue 40.2621% -82 - C5 -1HSS - IAA1_WHEAT -
12 SP3 39.8912% -91 - C4 -1EHX - ? -
33 HHSearch 38.7923% -67 - C5 -3OB4 - ? -
27 HHSearch 34.4926% -69 - C5 -1N89 - NLT2G_WHEAT -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




38 99.13100%-134 - C- -M038 - -
40 98.91100%-133 - C- -M040 - -
45 96.65100%-140 - C- -M045 - -
42 92.52100%-141 - C- -M042 - -
44 90.34100%-134 - C- -M044 - -