@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : 090_tII_WHEAT: (2014-05-01 )
ECQVTQLAVCASAILGGTKPSGECCGNLRAQQGCFCQYVKDPNYGHYVNSPHARETLQTCGIALPHC

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGM_B_2(1N89)
NLT2G_WHEAT
[Raw transfer]
11 HHSearch 98.0578%-126 - C3 -1N89 6.2 NLT2G_WHEAT
12 HHSearch 80.7561%-124 - C3 -1L6H - NLTPX_ORYSJ -
26 SP3 80.4461%-123 - C3 -1L6H - NLTPX_ORYSJ -
1 Fugue 80.4461%-123 - C3 -1L6H - NLTPX_ORYSJ -
2 Fugue 75.1532%-110 - C3 -2RKN - DIRL1_ARATH -
18 HHSearch 72.2429% -90 - C3 -1AFH - NLTP_MAIZE -
13 HHSearch 71.2130%-109 - C3 -2RKN - DIRL1_ARATH -
19 HHSearch 68.8535%-100 - C3 -1T12 - NLTP1_TOBAC -
27 SP3 66.6323% -80 * C3 *1FK5 - NLTP_MAIZE -
17 HHSearch 64.0331% -86 - C3 -2ALG - NLTP1_PRUPE -
3 Fugue 62.5128% -72 - C3 -1BWO - NLTP1_WHEAT -
20 HHSearch 62.1425%-110 - C3 -1HYP - HPSE_SOYBN -
14 HHSearch 60.4331% -47 - C3 -1BWO - NLTP1_WHEAT -
28 SP3 59.4916%-105 - C3 -1KNG - CYCY_BRADU -
30 SP3 56.2516% -96 - C3 -1U78 - TC3A_CAEEL -
15 HHSearch 56.2221% -71 - C3 -1SIY - NLTP1_VIGRR -
7 Fugue 50.1524% -71 * C4 *1CWV - -
34 SP3 49.0414%-108 - C3 -1TC3 - TC3A_CAEEL -
32 SP3 48.9513% -89 - C3 -1ELK - TOM1_HUMAN -
10 Fugue 48.8713% -80 - C3 -1S6D - 2SS8_HELAN -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGM_B_2(1N89)
NLT2G_WHEAT
[Raw transfer]
41 96.51100%-133 - C- -M041 - -
40 95.43100%-140 - C- -M040 - -
43 93.75100%-120 - C- -M043 - -