@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : 107_tII_WHEAT: (2014-05-01 )
QCNAGNLAVCASPIVSGTPPSKTCCNNLKSQRGCFCQFAHNRAYSSYINSPNARKTLVSCGVPVPKC

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGM_B_2(1N89)
NLT2G_WHEAT
[Raw transfer]




1 HHSearch 93.1958%-107 - C2 -1N89 6.0 NLT2G_WHEAT
2 HHSearch 93.1252%-109 - C2 -1L6H - NLTPX_ORYSJ -
26 SP3 91.8952%-109 - C2 -1L6H - NLTPX_ORYSJ -
17 Fugue 91.8952%-109 - C2 -1L6H - NLTPX_ORYSJ -
18 Fugue 75.5423% -89 - C2 -2RKN - DIRL1_ARATH -
3 HHSearch 72.2222% -98 - C2 -2RKN - DIRL1_ARATH -
9 HHSearch 71.1533% -86 - C2 -1T12 - NLTP1_TOBAC -
5 HHSearch 67.8234% -87 - C2 -1SIY - NLTP1_VIGRR -
19 Fugue 65.9030% -78 - C2 -1BWO - NLTP1_WHEAT -
8 HHSearch 65.6733% -86 - C2 -1AFH - NLTP_MAIZE -
7 HHSearch 64.4831% -82 - C2 -2ALG - NLTP1_PRUPE -
4 HHSearch 64.4633% -71 - C2 -1BWO - NLTP1_WHEAT -
27 SP3 59.1029% -65 * C2 *1FK5 - NLTP_MAIZE -
24 Fugue 58.9423% -88 - C2 -1MOL - MONB_DIOCU -
11 HHSearch 57.8525%-102 - C2 -1HYP - HPSE_SOYBN -
25 Fugue 53.5416% -47 - C1 -2KSS - CARS_MYXXA -
31 SP3 46.8816% -70 - C2 -1PS6 - PDXA_ECOLI -
28 SP3 44.4313% -90 - C2 -1KNG - CYCY_BRADU -
29 SP3 42.907% -86 - C2 -1U78 - TC3A_CAEEL -
33 SP3 41.938% -97 - C2 -1TC3 - TC3A_CAEEL -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGM_B_2(1N89)
NLT2G_WHEAT
[Raw transfer]




37 97.38100%-129 - C- -M037 - -
41 96.31100%-126 - C- -M041 - -
40 90.77100%-116 - C- -M040 - -