@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-03 )
HITCGTVTSTMTQCISYLTNGGPLPSSCCVAVKSLNQMAQTTPDRRQVCECLKSAGKEIKGLNIDLVAALPTTCGVSLSYPIGFNTNCDSISIAV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]




OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




15 HHSearch 93.0346%-137 - C2 -1SIY - NLTP1_VIGRR -
12 HHSearch 92.4943%-147 - C2 -2ALG 2.8 NLTP1_PRUPE
28 SP3 92.4442%-137 - C2 -1FK5 5.7 NLTP_MAIZE
13 HHSearch 92.0643%-140 - C2 -1AFH - NLTP_MAIZE -
14 HHSearch 91.6946%-140 - C2 -1T12 - NLTP1_TOBAC -
16 HHSearch 90.2038%-146 - C2 -1BWO - NLTP1_WHEAT -
26 HHSearch 65.1227%-140 - C2 -1SM7 - ? -
33 SP3 61.2012%-164 - C2 -1HSS - IAA1_WHEAT -
23 HHSearch 59.2822%-158 - C2 -1BEA - ITRF_MAIZE -
2 Fugue 58.4624% -96 - C2 -2RKN - DIRL1_ARATH -
17 HHSearch 57.6623%-131 - C2 -2RKN - DIRL1_ARATH -
21 HHSearch 55.9517%-137 - C2 -1B1U - IAAT_ELECO -
22 HHSearch 55.1925% -99 - C2 -1PSY - 2SS_RICCO -
31 SP3 52.2912%-139 * C3 *1QPO - NADC_MYCTU -
19 HHSearch 44.3320%-110 - C2 -1N89 - NLT2G_WHEAT -
32 SP3 44.2614% -82 - C2 -1L6H - NLTPX_ORYSJ -
18 HHSearch 43.0920% -75 - C2 -1L6H - NLTPX_ORYSJ -
25 HHSearch 42.4122% -92 * C2 *3OB4 - ? -
3 Fugue 39.1614% -90 - C2 -1L6H - NLTPX_ORYSJ -
37 SP3 38.9011% -96 - C3 -1YTD - PNCB_THEAC -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]




OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




42 97.25100%-159 - C- -M042 - -
41 96.65100%-176 - C- -M041 - -
45 94.47100%-164 - C- -M045 - -