@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-03 )
AITCGTVTSSLAPCATYLSSGGEVPPPCCAGVKKLNGMAQTTADRQQACKCLKAAAQGINPSLASSLPGKCSVSIPYPISMSTNCDNVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
17 HHSearch 96.4058%-130 - C4 -1T12 - NLTP1_TOBAC -
19 HHSearch 95.5157%-119 - C4 -1SIY - NLTP1_VIGRR -
15 HHSearch 92.8261%-123 - C4 -2ALG 3.9 NLTP1_PRUPE
11 SP3 91.6253%-125 - C4 -1FK5 5.3 NLTP_MAIZE
16 HHSearch 91.1054%-111 - C4 -1AFH - NLTP_MAIZE -
20 HHSearch 81.0844%-119 - C4 -1BWO 2.8 NLTP1_WHEAT
31 HHSearch 61.9425%-119 - C4 -1SM7 - ? -
2 Fugue 58.4429% -78 - C4 -2RKN - DIRL1_ARATH -
27 HHSearch 56.4420%-112 - C4 -1BEA - ITRF_MAIZE -
21 HHSearch 54.3126% -92 - C4 -2RKN - DIRL1_ARATH -
25 HHSearch 51.5224%-101 - C4 -1S6D - 2SS8_HELAN -
26 HHSearch 51.3616%-100 - C4 -1B1U - IAAT_ELECO -
29 HHSearch 48.1324% -71 - C4 -1PSY - 2SS_RICCO -
12 SP3 41.0012% -80 - C3 -1EHX - ? -
6 Fugue 40.1018% -78 - C4 -1L6H - NLTPX_ORYSJ -
10 Fugue 38.7420% -44 - C4 -1PSY - 2SS_RICCO -
22 HHSearch 36.9825% -70 - C4 -1L6H - NLTPX_ORYSJ -
28 HHSearch 35.1119% -50 - C4 -3OB4 - ? -
23 HHSearch 35.0633% -60 - C4 -1N89 - NLT2G_WHEAT -
14 SP3 25.518% -58 - C4 -1HCR - -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
35 98.34100%-126 - C- -M035 - -
38 98.19100%-135 - C- -M038 - -
36 94.63100%-135 - C- -M036 - -