@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-03 )
AISCGTVTSNLAPCAVYLMKGGPVPAPCCAGVSKLNSMAKTTPDRQQACKCLKTAAKNVNPSLASSLPGKCGVSIPYPISMSTNCDTVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




21 HHSearch 92.7756%-120 - C5 -1T12 - NLTP1_TOBAC -
23 HHSearch 91.5652%-118 - C5 -1SIY - NLTP1_VIGRR -
19 HHSearch 90.8461%-119 - C5 -2ALG 3.8 NLTP1_PRUPE
11 SP3 86.4055%-118 - C5 -1FK5 5.4 NLTP_MAIZE
20 HHSearch 84.9655%-103 - C5 -1AFH - NLTP_MAIZE -
24 HHSearch 82.4245%-114 - C5 -1BWO 2.8 NLTP1_WHEAT
34 HHSearch 69.5830%-138 - C5 -1SM7 - ? -
37 HHSearch 66.2725% -94 - C5 -1W2Q - CONG_ARAHY -
38 HHSearch 63.4121%-140 * C5 *1HSS - IAA1_WHEAT -
9 Fugue 54.2120% -70 - C5 -1PSY - 2SS_RICCO -
31 HHSearch 54.0020%-128 - C5 -1BEA - ITRF_MAIZE -
29 HHSearch 53.7826%-111 - C5 -1S6D - 2SS8_HELAN -
25 HHSearch 53.5728% -81 - C5 -2RKN - DIRL1_ARATH -
2 Fugue 51.8531% -54 - C5 -2RKN - DIRL1_ARATH -
5 Fugue 48.7620% -76 - C5 -1L6H - NLTPX_ORYSJ -
35 HHSearch 48.6523% -78 - C5 -1PSY - 2SS_RICCO -
30 HHSearch 47.9318%-110 - C5 -1B1U - IAAT_ELECO -
8 Fugue 46.5822% -85 - C5 -1HSS - IAA1_WHEAT -
26 HHSearch 44.1430% -85 - C5 -1L6H - NLTPX_ORYSJ -
10 Fugue 42.7517% -39 - C5 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




41 98.41100%-137 - C- -M041 - -
47 95.30100%-133 - C- -M047 - -
40 94.36100%-119 - C- -M040 - -
44 91.83100%-138 - C- -M044 - -
42 34.66100% 7 - C- -M042 - -