@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-03 )
ALSCGTVSGYVAPCIGYLAQNAPALPRACCSGVTSLNNLARTTPDRQQACRCLVGAANALPTINAARAAGLPKACGVNIPYKISKTTNCNSVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
11 SP3 92.2650%-136 - C3 -1FK5 4.5 NLTP_MAIZE
18 HHSearch 91.9854%-137 - C3 -2ALG 3.8 NLTP1_PRUPE
16 HHSearch 91.3654%-131 - C3 -1T12 - NLTP1_TOBAC -
20 HHSearch 90.7851%-139 - C3 -1SIY - NLTP1_VIGRR -
15 HHSearch 88.7951%-132 - C3 -1AFH - NLTP_MAIZE -
19 HHSearch 85.4242%-141 - C3 -1BWO - NLTP1_WHEAT -
24 HHSearch 59.7920%-169 - C3 -1BEA - ITRF_MAIZE -
31 HHSearch 58.2923%-148 - C3 -1SM7 - ? -
33 HHSearch 55.0616%-113 - C3 -1W2Q - CONG_ARAHY -
4 Fugue 54.5321% -91 - C3 -1PSY - 2SS_RICCO -
28 HHSearch 53.3022%-101 - C3 -1PSY - 2SS_RICCO -
26 HHSearch 52.6621%-136 - C3 -1S6D - 2SS8_HELAN -
21 HHSearch 52.2620%-116 - C3 -2RKN - DIRL1_ARATH -
5 Fugue 51.0413% -66 - C3 -1W2Q - CONG_ARAHY -
27 HHSearch 48.5212%-149 - C3 -1B1U - IAAT_ELECO -
8 Fugue 47.5829%-103 - C3 -1L6H - NLTPX_ORYSJ -
2 Fugue 45.4221% -94 - C3 -2RKN - DIRL1_ARATH -
23 HHSearch 44.7823%-109 - C3 -1N89 - NLT2G_WHEAT -
22 HHSearch 42.4130%-105 - C3 -1L6H - NLTPX_ORYSJ -
29 HHSearch 37.5020% -92 - C3 -3OB4 - ? -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
35 95.87100%-144 - C- -M035 - -
41 91.78100%-153 - C- -M041 - -
39 91.77100%-151 - C- -M039 - -