@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-03 )
ALTCGTVNSNVAPCIGYITQGGPLPRACCTGVSKLNSMARTTPDRQQACRCLKTAASALGPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
22 HHSearch 92.4852%-114 - C2 -1T12 - NLTP1_TOBAC -
21 HHSearch 91.5851%-133 - C2 -2ALG 3.7 NLTP1_PRUPE
11 SP3 89.7652%-129 - C2 -1FK5 4.6 NLTP_MAIZE
23 HHSearch 88.3153%-115 - C2 -1AFH - NLTP_MAIZE -
25 HHSearch 86.9647%-131 - C2 -1SIY - NLTP1_VIGRR -
26 HHSearch 83.9844%-126 - C2 -1BWO 4.4 NLTP1_WHEAT
36 HHSearch 66.2227%-141 - C2 -1SM7 - ? -
33 HHSearch 65.5627% -99 - C2 -1PSY - 2SS_RICCO -
32 HHSearch 58.6125%-140 - C2 -1BEA - ITRF_MAIZE -
27 HHSearch 55.1619%-114 - C2 -2RKN - DIRL1_ARATH -
2 Fugue 54.3923% -86 - C2 -2RKN - DIRL1_ARATH -
13 SP3 53.2113%-118 - C2 -1HSS - IAA1_WHEAT -
7 Fugue 48.7816% -76 - C2 -1W2Q - CONG_ARAHY -
15 SP3 47.9413% -87 - C2 -1QPO - NADC_MYCTU -
38 HHSearch 44.9916%-114 - C2 -1S6D - 2SS8_HELAN -
31 HHSearch 44.6414%-125 - C2 -1B1U - IAAT_ELECO -
3 Fugue 42.9927% -70 - C2 -1L6H - NLTPX_ORYSJ -
29 HHSearch 42.8927% -79 - C2 -1N89 - NLT2G_WHEAT -
34 HHSearch 41.5316% -85 - C2 -3OB4 - ? -
12 SP3 40.9421% -68 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
42 97.16100%-132 - C- -M042 - -
39 95.56100%-127 - C- -M039 - -
40 92.53100%-127 - C- -M040 - -