@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-03 )
ALSCGTVSGNLAACIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 SP3 93.1452%-129 - C2 -1FK5 4.7 NLTP_MAIZE
22 HHSearch 91.0955%-123 - C2 -1T12 - NLTP1_TOBAC -
21 HHSearch 89.0354%-127 - C2 -2ALG 3.8 NLTP1_PRUPE
23 HHSearch 87.4652%-116 - C2 -1AFH - NLTP_MAIZE -
25 HHSearch 84.7255%-125 - C2 -1SIY - NLTP1_VIGRR -
26 HHSearch 82.8441%-127 - C2 -1BWO 6.5 NLTP1_WHEAT
40 HHSearch 60.4825%-169 - C2 -1HSS - IAA1_WHEAT -
32 HHSearch 59.2525%-160 - C2 -1BEA - ITRF_MAIZE -
36 HHSearch 59.2429%-145 - C2 -1SM7 - ? -
15 SP3 57.6919%-143 - C2 -1HSS - IAA1_WHEAT -
39 HHSearch 51.9018%-115 - C2 -1W2Q - CONG_ARAHY -
34 HHSearch 50.3426% -90 - C2 -1PSY - 2SS_RICCO -
27 HHSearch 50.1624%-114 - C2 -2RKN - DIRL1_ARATH -
38 HHSearch 49.7823%-118 - C2 -1S6D - 2SS8_HELAN -
31 HHSearch 48.5117%-140 - C2 -1B1U - IAAT_ELECO -
10 Fugue 48.1816% -67 - C2 -1W2Q - CONG_ARAHY -
2 Fugue 46.4122% -87 - C2 -2RKN - DIRL1_ARATH -
9 Fugue 45.8722% -66 - C2 -1PSY - 2SS_RICCO -
3 Fugue 43.9925% -84 - C2 -1L6H - NLTPX_ORYSJ -
8 Fugue 43.6822%-100 - C2 -1HSS - IAA1_WHEAT -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]
41 95.00100%-139 - C- -M041 - -
42 94.99100%-143 - C- -M042 - -
48 89.22100%-141 - C- -M048 - -