@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-03 )
LNCGQVTSAMAPCVPYLMGRGPLGGCCGGVKGLMGAAKTPADRKTACTCLKSAANSMKGIDAGKAAGLPAACGVNIPYKISPSTDCSKVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
9 HHSearch 94.0570%-135 - C3 -1T12 - NLTP1_TOBAC -
30 SP3 85.3457%-123 - C3 -1FK5 4.2 NLTP_MAIZE
12 HHSearch 79.4646%-125 - C3 -1SIY - NLTP1_VIGRR -
11 HHSearch 78.6758%-117 - C3 -1AFH - NLTP_MAIZE -
10 HHSearch 77.4548%-132 - C3 -2ALG 2.4 NLTP1_PRUPE
14 HHSearch 75.5144%-129 - C3 -1BWO - NLTP1_WHEAT -
28 HHSearch 70.6130%-155 - C3 -1HSS - IAA1_WHEAT -
21 HHSearch 55.6526%-158 - C3 -1BEA - ITRF_MAIZE -
22 HHSearch 51.3326%-116 - C3 -1SM7 - ? -
24 HHSearch 50.1527% -99 - C3 -1PSY - 2SS_RICCO -
25 HHSearch 46.1627%-124 - C3 -1S6D - 2SS8_HELAN -
23 HHSearch 44.6420%-103 - C3 -3OB4 - ? -
2 Fugue 44.1126% -75 - C3 -2RKN - DIRL1_ARATH -
29 HHSearch 43.5620%-108 - C3 -2LVF - ? -
15 HHSearch 43.4126% -99 - C3 -2RKN - DIRL1_ARATH -
3 Fugue 43.2419%-106 - C3 -1L6H - NLTPX_ORYSJ -
19 HHSearch 41.0414%-130 * C3 *1B1U - IAAT_ELECO -
16 HHSearch 35.2921%-101 - C3 -1L6H - NLTPX_ORYSJ -
18 HHSearch 31.3128% -50 - C3 -1PNB - ? -
17 HHSearch 29.9527% -52 - C3 -1N89 - NLT2G_WHEAT -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
36 93.43100%-140 - C- -M036 - -
40 92.32100%-145 - C- -M040 - -
37 91.84100%-141 - C- -M037 - -