@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
LTCGQVQSRMTPCLPYLTGSGPLGRCCGGVKGLLGAAKTPADRKTVCTCLKSAAGSIGGINVRKAAGLPNMCGVNIPYQISPSADCTKVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
9 HHSearch 96.8469%-137 - C3 -1T12 - NLTP1_TOBAC -
12 HHSearch 86.6249%-132 - C3 -1SIY - NLTP1_VIGRR -
11 HHSearch 82.9146%-140 - C3 -2ALG 2.8 NLTP1_PRUPE
10 HHSearch 82.4250%-124 - C3 -1AFH - NLTP_MAIZE -
29 SP3 81.4450%-132 * C3 *1FK5 5.6 NLTP_MAIZE
14 HHSearch 81.1545%-132 - C3 -1BWO 4.2 NLTP1_WHEAT
21 HHSearch 57.9829%-132 - C3 -1SM7 - ? -
22 HHSearch 53.2925%-154 - C3 -1BEA - ITRF_MAIZE -
24 HHSearch 53.2224% -95 - C3 -1PSY - 2SS_RICCO -
25 HHSearch 48.4122%-123 - C3 -1S6D - 2SS8_HELAN -
27 HHSearch 48.1018%-114 - C3 -1W2Q - CONG_ARAHY -
15 HHSearch 47.6928%-104 - C3 -2RKN - DIRL1_ARATH -
2 Fugue 47.0926% -93 - C3 -2RKN - DIRL1_ARATH -
23 HHSearch 46.7325%-104 - C3 -3OB4 - ? -
20 HHSearch 46.3517%-137 - C3 -1B1U - IAAT_ELECO -
3 Fugue 43.3722%-109 - C3 -1L6H - NLTPX_ORYSJ -
6 Fugue 40.2916% -73 - C3 -1W2Q - CONG_ARAHY -
16 HHSearch 39.8826% -80 - C3 -1L6H - NLTPX_ORYSJ -
18 HHSearch 36.7433% -87 - C3 -1PNB - ? -
17 HHSearch 32.7225% -58 - C3 -1N89 - NLT2G_WHEAT -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
37 97.52100%-160 - C- -M037 - -
33 95.37100%-141 - C- -M033 - -
39 94.87100%-149 - C- -M039 - -
35 94.80100%-144 - C- -M035 - -