@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
ITCGQVSSALAPCIFYLRAGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
21 HHSearch 94.0868%-131 - C2 -2ALG 3.9 NLTP1_PRUPE
23 HHSearch 92.6363%-136 - C2 -1T12 - NLTP1_TOBAC -
11 SP3 90.6362%-126 - C2 -1FK5 5.4 NLTP_MAIZE
24 HHSearch 89.2853%-135 - C2 -1SIY - NLTP1_VIGRR -
22 HHSearch 85.7263%-123 - C2 -1AFH - NLTP_MAIZE -
26 HHSearch 84.1849%-131 - C2 -1BWO 6.8 NLTP1_WHEAT
34 HHSearch 61.9132%-144 - C2 -1SM7 - ? -
33 HHSearch 57.8021%-156 - C2 -1BEA - ITRF_MAIZE -
16 SP3 56.6924%-140 - C2 -1HSS - IAA1_WHEAT -
39 HHSearch 56.6022%-149 - C2 -1HSS - IAA1_WHEAT -
27 HHSearch 54.2825%-104 - C2 -2RKN - DIRL1_ARATH -
15 SP3 51.3217%-116 - C2 -1QPO - NADC_MYCTU -
35 HHSearch 50.0126% -88 - C2 -1PSY - 2SS_RICCO -
17 SP3 49.7917%-116 - C2 -1QPO - NADC_MYCTU -
2 Fugue 49.0723% -81 - C2 -2RKN - DIRL1_ARATH -
32 HHSearch 48.5316%-154 - C2 -1B1U - IAAT_ELECO -
4 Fugue 47.3020%-117 - C2 -1L6H - NLTPX_ORYSJ -
37 HHSearch 45.6520%-123 - C2 -1S6D - 2SS8_HELAN -
13 SP3 43.8218% -98 - C2 -1L6H - NLTPX_ORYSJ -
19 SP3 41.9017% -81 - C2 -1NGK - TRHBO_MYCTU -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
45 94.74100%-139 - C- -M045 - -
40 93.55100%-140 - C- -M040 - -
44 92.92100%-133 - C- -M044 - -