@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
VLTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRVV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
19 HHSearch 93.1255%-140 - C4 -2ALG 3.7 NLTP1_PRUPE
17 HHSearch 92.0560%-132 - C4 -1T12 - NLTP1_TOBAC -
11 SP3 91.6755%-121 - C4 -1FK5 5.4 NLTP_MAIZE
22 HHSearch 90.0053%-138 - C4 -1SIY - NLTP1_VIGRR -
18 HHSearch 88.3255%-127 - C4 -1AFH - NLTP_MAIZE -
21 HHSearch 84.4041%-132 - C4 -1BWO 6.5 NLTP1_WHEAT
36 HHSearch 72.2428%-166 - C4 -1HSS - IAA1_WHEAT -
30 HHSearch 67.6129%-141 - C4 -1SM7 - ? -
29 HHSearch 61.2021%-147 - C4 -1BEA - ITRF_MAIZE -
6 Fugue 60.7021% -66 - C4 -1PSY - 2SS_RICCO -
5 Fugue 58.9320%-105 - C4 -1S6D - 2SS8_HELAN -
2 Fugue 58.5721%-100 - C4 -2RKN - DIRL1_ARATH -
23 HHSearch 56.6321% -98 - C4 -2RKN - DIRL1_ARATH -
32 HHSearch 55.6725% -99 - C4 -1PSY - 2SS_RICCO -
33 HHSearch 54.8622%-117 - C4 -1S6D - 2SS8_HELAN -
34 HHSearch 52.6118% -87 - C4 -1W2Q - CONG_ARAHY -
31 HHSearch 48.7428% -68 - C4 -3OB4 - ? -
27 HHSearch 48.5815%-122 - C4 -1B1U - IAAT_ELECO -
24 HHSearch 44.7926%-110 - C4 -1L6H - NLTPX_ORYSJ -
3 Fugue 43.2612% -66 - C4 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
39 95.82100%-149 - C- -M039 - -
38 95.51100%-151 - C- -M038 - -
44 94.03100%-144 - C- -M044 - -
41 93.08100%-144 - C- -M041 - -