@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
VDCKDVNSNLATCIPYLTGKDTAPPTTCCDGVKNLPKIAQTTADRRAACECVKAAASHYTINEKAASSLPKDCGAVINIPISKTTNCQQIN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
13 HHSearch 94.9848% -91 - C2 -1SIY - NLTP1_VIGRR -
12 HHSearch 93.0544%-103 - C2 -1T12 - NLTP1_TOBAC -
32 SP3 91.0243% -87 - C2 -1FK5 4.2 NLTP_MAIZE
15 HHSearch 88.8242% -98 - C2 -2ALG 2.7 NLTP1_PRUPE
16 HHSearch 88.5338% -93 - C2 -1BWO - NLTP1_WHEAT -
11 HHSearch 88.4444% -78 - C2 -1AFH - NLTP_MAIZE -
8 Fugue 63.4122% -96 - C2 -1S6D - 2SS8_HELAN -
25 HHSearch 60.7921%-103 - C2 -1SM7 - ? -
28 HHSearch 60.3918% -88 - C2 -1W2Q - CONG_ARAHY -
2 Fugue 59.6524% -66 - C2 -2RKN - DIRL1_ARATH -
9 Fugue 59.4323% -63 - C2 -1PSY - 2SS_RICCO -
30 HHSearch 59.2123%-100 - C2 -1S6D - 2SS8_HELAN -
22 HHSearch 58.4823% -84 - C2 -1PSY - 2SS_RICCO -
26 HHSearch 58.4519%-100 - C2 -1BEA - ITRF_MAIZE -
29 HHSearch 57.4518%-100 * C2 *1HSS - IAA1_WHEAT -
31 HHSearch 54.8720% -72 - C2 -2LVF - ? -
38 SP3 53.5610% -89 - C2 -1QPO - NADC_MYCTU -
36 SP3 52.3610% -89 - C2 -1QPO - NADC_MYCTU -
17 HHSearch 50.9423% -66 - C2 -2RKN - DIRL1_ARATH -
41 SP3 49.729% -61 - C2 -1A0P - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
45 96.21100%-119 - C- -M045 - -
44 94.86100%-114 - C- -M044 - -
46 89.01100%-101 - C- -M046 - -
48 88.30100%-102 - C- -M048 - -