@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
AITCGQVTHNVAPCFNYVKSGGAVPAACCKGVSNLNSMAKTTADRQQTCNCLKSAAGSIKGLNANLAAGLPGKCGVNVPYKISTSTNCNNVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 HHSearch 93.0262%-123 - C2 -2ALG 3.7 NLTP1_PRUPE
12 HHSearch 88.6359%-106 - C2 -1T12 - NLTP1_TOBAC -
15 HHSearch 86.9257%-113 - C2 -1SIY - NLTP1_VIGRR -
31 SP3 84.6855%-116 - C2 -1FK5 5.4 NLTP_MAIZE
16 HHSearch 84.2647%-127 - C2 -1BWO 6.6 NLTP1_WHEAT
13 HHSearch 81.4855% -99 - C2 -1AFH - NLTP_MAIZE -
27 HHSearch 62.3625%-132 - C2 -1SM7 - ? -
29 HHSearch 58.1920%-142 * C2 *1HSS - IAA1_WHEAT -
26 HHSearch 57.3322%-118 - C2 -1BEA - ITRF_MAIZE -
36 SP3 51.9317%-109 - C2 -1HSS - IAA1_WHEAT -
17 HHSearch 50.8626% -97 - C2 -2RKN - DIRL1_ARATH -
24 HHSearch 50.3022% -73 - C2 -1PSY - 2SS_RICCO -
2 Fugue 50.0824% -74 - C2 -2RKN - DIRL1_ARATH -
5 Fugue 48.0120% -63 - C2 -1PSY - 2SS_RICCO -
30 HHSearch 47.0618% -90 - C2 -2LVF - ? -
10 Fugue 46.7921% -90 - C2 -1S6D - 2SS8_HELAN -
23 HHSearch 42.3717% -97 - C2 -1B1U - IAAT_ELECO -
38 SP3 40.1215% -91 - C2 -1QPO - NADC_MYCTU -
3 Fugue 39.0625% -60 - C2 -1L6H - NLTPX_ORYSJ -
33 SP3 38.2518% -63 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
42 95.87100%-131 - C- -M042 - -
46 94.94100%-130 - C- -M046 - -
41 94.84100%-127 - C- -M041 - -
47 92.43100%-125 - C- -M047 - -
43 91.59100%-133 - C- -M043 - -