@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
ITCGQVASSISPCVNYVKSGGAVPAACCNGIRSLNSAAKTTADRQTTCNCLKQASGAIKGLNPNLAAGLPGKCGVNVPYKISTSTNCAAVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




10 HHSearch 97.5069%-119 - C3 -2ALG 3.4 NLTP1_PRUPE
30 SP3 91.8057%-114 - C3 -1FK5 5.3 NLTP_MAIZE
15 HHSearch 88.4143%-126 - C3 -1BWO - NLTP1_WHEAT -
13 HHSearch 86.6353%-117 - C3 -1SIY - NLTP1_VIGRR -
12 HHSearch 86.6254%-105 - C3 -1T12 - NLTP1_TOBAC -
11 HHSearch 84.9457%-103 - C3 -1AFH - NLTP_MAIZE -
28 HHSearch 58.2416%-133 - C3 -1HSS - IAA1_WHEAT -
23 HHSearch 57.7525%-121 - C3 -1SM7 - ? -
22 HHSearch 54.9622%-110 - C3 -1BEA - ITRF_MAIZE -
35 SP3 53.2015%-121 * C3 *1HSS - IAA1_WHEAT -
27 HHSearch 52.8621% -96 - C3 -2LVF - ? -
16 HHSearch 51.6725% -94 - C3 -2RKN - DIRL1_ARATH -
29 HHSearch 50.0418% -89 - C3 -1W2Q - CONG_ARAHY -
2 Fugue 49.9924% -69 - C3 -2RKN - DIRL1_ARATH -
6 Fugue 49.8319% -32 - C3 -1PSY - 2SS_RICCO -
25 HHSearch 44.5120% -66 - C3 -1PSY - 2SS_RICCO -
21 HHSearch 43.5317%-100 - C3 -1B1U - IAAT_ELECO -
18 HHSearch 41.4926% -88 - C3 -1N89 - NLT2G_WHEAT -
24 HHSearch 40.7524% -55 - C3 -3OB4 - ? -
7 Fugue 39.6011% -55 - C3 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




45 99.12100%-130 - C- -M045 - -
43 97.67100%-131 - C- -M043 - -
42 97.18100%-123 - C- -M042 - -
46 94.65100%-118 - C- -M046 - -