@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
ITCGQVASNISPCVTYVKSGGAVPAPCCSGIRNLNGMAKTTADRQATCNCLKQAAGGIKGLNPNLAAGLPGKCGVSVPYKISTTTNCAAVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
10 HHSearch 96.7367%-125 - C3 -2ALG 3.7 NLTP1_PRUPE
27 SP3 90.9959%-120 - C3 -1FK5 5.3 NLTP_MAIZE
15 HHSearch 89.1546%-131 - C3 -1BWO 4.5 NLTP1_WHEAT
13 HHSearch 88.4653%-111 - C3 -1T12 - NLTP1_TOBAC -
12 HHSearch 87.3754%-119 - C3 -1SIY - NLTP1_VIGRR -
11 HHSearch 85.0859%-105 - C3 -1AFH - NLTP_MAIZE -
25 HHSearch 64.0325%-136 - C3 -1SM7 - ? -
22 HHSearch 54.6724%-113 - C3 -1BEA - ITRF_MAIZE -
32 SP3 52.3417%-115 * C3 *1HSS - IAA1_WHEAT -
2 Fugue 50.9627% -62 - C3 -2RKN - DIRL1_ARATH -
16 HHSearch 49.2526% -74 - C3 -2RKN - DIRL1_ARATH -
21 HHSearch 44.9919%-104 - C3 -1B1U - IAAT_ELECO -
7 Fugue 44.4920% -32 - C3 -1PSY - 2SS_RICCO -
23 HHSearch 44.1123% -64 - C3 -1PSY - 2SS_RICCO -
31 SP3 43.5216%-106 - C3 -1QPO - NADC_MYCTU -
33 SP3 42.3216%-102 - C3 -1QPO - NADC_MYCTU -
24 HHSearch 40.3222% -67 - C3 -3OB4 - ? -
6 Fugue 40.0212% -55 - C3 -1W2Q - CONG_ARAHY -
18 HHSearch 39.1026% -92 - C3 -1N89 - NLT2G_WHEAT -
4 Fugue 37.6426% -83 - C3 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
39 98.84100%-140 - C- -M039 - -
37 96.67100%-129 - C- -M037 - -
43 93.72100%-135 - C- -M043 - -