@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
ITCGQVASNISPCLTYVKSGGAVPAACCSGIRNLNGMAKTTADRQAACNCLKQAAGGIKGLNPNLAAGLPGKCGVSVPYKISTTTNCAAVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 HHSearch 94.8969%-133 - C4 -2ALG 3.8 NLTP1_PRUPE
30 SP3 88.4460%-128 - C4 -1FK5 5.4 NLTP_MAIZE
16 HHSearch 88.2448%-141 - C4 -1BWO 6.5 NLTP1_WHEAT
14 HHSearch 85.6156%-119 - C4 -1T12 - NLTP1_TOBAC -
12 HHSearch 84.2860%-113 - C4 -1AFH - NLTP_MAIZE -
13 HHSearch 83.9554%-127 - C4 -1SIY - NLTP1_VIGRR -
25 HHSearch 61.8525%-140 - C4 -1SM7 - ? -
23 HHSearch 56.9324%-131 - C4 -1BEA - ITRF_MAIZE -
29 HHSearch 55.8616%-147 - C4 -1HSS - IAA1_WHEAT -
17 HHSearch 49.6625%-105 - C4 -2RKN - DIRL1_ARATH -
22 HHSearch 48.6419%-123 - C4 -1B1U - IAAT_ELECO -
26 HHSearch 44.3520% -78 * C4 *1PSY - 2SS_RICCO -
2 Fugue 44.3126% -72 - C4 -2RKN - DIRL1_ARATH -
6 Fugue 44.2521% -38 - C4 -1PSY - 2SS_RICCO -
27 HHSearch 43.9518%-105 - C4 -1S6D - 2SS8_HELAN -
34 SP3 43.2818%-120 - C4 -1QPO - NADC_MYCTU -
38 SP3 42.6918%-117 - C4 -1QPO - NADC_MYCTU -
7 Fugue 40.1312% -64 - C4 -1W2Q - CONG_ARAHY -
24 HHSearch 38.6722% -83 - C4 -3OB4 - ? -
9 Fugue 38.2417% -47 - C4 -3HL6 - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
46 95.36100%-137 - C- -M046 - -
44 94.93100%-147 - C- -M044 - -
47 93.32100%-140 - C- -M047 - -
45 90.92100%-135 - C- -M045 - -