@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
AVTCGQVTSSLAPCINYLRGTGAGAIPPGCCSGIKSLNSAAQTTPDRQAACKCIKSAAAGIPGINFGLASGLPGKCGVNIPYKISPSTDCSSVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
21 HHSearch 93.6164%-124 - C1 -2ALG 4.0 NLTP1_PRUPE
11 SP3 93.1659%-125 - C1 -1FK5 5.2 NLTP_MAIZE
23 HHSearch 92.4766%-129 - C1 -1T12 - NLTP1_TOBAC -
25 HHSearch 89.5454%-129 - C1 -1SIY - NLTP1_VIGRR -
22 HHSearch 87.8060%-120 - C1 -1AFH - NLTP_MAIZE -
26 HHSearch 84.8044%-134 - C1 -1BWO 4.0 NLTP1_WHEAT
6 Fugue 60.0324%-107 - C1 -1S6D - 2SS8_HELAN -
35 HHSearch 58.4226%-135 - C1 -1SM7 - ? -
39 HHSearch 56.9320%-151 * C1 *1HSS - IAA1_WHEAT -
8 Fugue 55.6619%-122 - C1 -1HSS - IAA1_WHEAT -
34 HHSearch 55.5917%-143 - C1 -1BEA - ITRF_MAIZE -
33 HHSearch 54.0617%-116 - C1 -1B1U - IAAT_ELECO -
27 HHSearch 53.7724%-114 - C1 -2RKN - DIRL1_ARATH -
2 Fugue 52.8125%-101 - C1 -2RKN - DIRL1_ARATH -
10 Fugue 51.6420% -46 - C1 -4HR1 - ? -
40 HHSearch 50.4314% -96 - C1 -1W2Q - CONG_ARAHY -
31 HHSearch 49.8322%-119 - C1 -1S6D - 2SS8_HELAN -
41 HHSearch 49.3021%-106 - C1 -2LVF - ? -
37 HHSearch 46.2425% -82 - C1 -1PSY - 2SS_RICCO -
29 HHSearch 41.9423% -94 - C1 -1N89 - NLT2G_WHEAT -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
49 95.32100%-135 - C- -M049 - -
42 94.37100%-127 - C- -M042 - -
48 93.29100%-131 - C- -M048 - -
46 93.11100%-120 - C- -M046 - -
44 92.66100%-127 - C- -M044 - -