@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
AISCGQITSALAPCIAYLKGNGAGSAPPACCNGIRSLNSAAKTTPDRQAACSCIKSAATGISGINYSTAAGLPGKCGINIPYKISPSTDCKSIK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
19 HHSearch 95.6162%-130 - C2 -1T12 - NLTP1_TOBAC -
11 SP3 92.2058%-126 - C2 -1FK5 5.3 NLTP_MAIZE
18 HHSearch 91.3760%-129 - C2 -2ALG 3.9 NLTP1_PRUPE
17 HHSearch 90.3658%-117 - C2 -1AFH - NLTP_MAIZE -
21 HHSearch 84.9352%-129 - C2 -1SIY - NLTP1_VIGRR -
22 HHSearch 81.9040%-130 - C2 -1BWO - NLTP1_WHEAT -
35 HHSearch 61.9721%-145 * C2 *1HSS - IAA1_WHEAT -
30 HHSearch 60.4229%-134 - C2 -1SM7 - ? -
29 HHSearch 60.3818%-144 - C2 -1BEA - ITRF_MAIZE -
7 Fugue 59.9824% -99 - C2 -1S6D - 2SS8_HELAN -
8 Fugue 55.5523%-132 - C2 -1HSS - IAA1_WHEAT -
28 HHSearch 52.3215%-133 - C2 -1B1U - IAAT_ELECO -
32 HHSearch 50.9921% -91 - C2 -1PSY - 2SS_RICCO -
36 HHSearch 50.7015%-102 - C2 -1W2Q - CONG_ARAHY -
33 HHSearch 50.1524%-115 - C2 -1S6D - 2SS8_HELAN -
5 Fugue 48.0320% -82 - C2 -1PSY - 2SS_RICCO -
2 Fugue 47.5323% -95 - C2 -2RKN - DIRL1_ARATH -
23 HHSearch 47.4922%-114 - C2 -2RKN - DIRL1_ARATH -
4 Fugue 41.9921% -96 - C2 -1L6H - NLTPX_ORYSJ -
6 Fugue 41.9514% -58 - C2 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
43 97.96100%-135 - C- -M043 - -
37 96.10100%-128 - C- -M037 - -