@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
APYTEALSCGQVSSSLAPCISYLTKGGAVPPACCSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
23 HHSearch 92.4164%-112 - C2 -1T12 - NLTP1_TOBAC -
11 SP3 92.1562%-115 - C2 -1FK5 5.7 NLTP_MAIZE
25 HHSearch 90.4854%-122 - C2 -1SIY - NLTP1_VIGRR -
21 HHSearch 89.9766%-117 - C2 -2ALG 3.8 NLTP1_PRUPE
22 HHSearch 89.0566%-107 - C2 -1AFH - NLTP_MAIZE -
26 HHSearch 85.5547%-122 - C2 -1BWO 7.0 NLTP1_WHEAT
37 HHSearch 62.4824%-138 - C2 -1SM7 - ? -
5 Fugue 61.9625% -84 - C2 -1S6D - 2SS8_HELAN -
4 Fugue 60.4219% -82 - C2 -2FOK - T2F1_PLAOK -
34 HHSearch 56.9321%-140 - C2 -1BEA - ITRF_MAIZE -
6 Fugue 55.9723% -76 - C2 -1PSY - 2SS_RICCO -
33 HHSearch 55.1923%-116 - C2 -1S6D - 2SS8_HELAN -
35 HHSearch 53.6725% -93 - C2 -1PSY - 2SS_RICCO -
17 SP3 53.4919% -96 - C2 -1HSS - IAA1_WHEAT -
27 HHSearch 47.6926% -97 - C2 -2RKN - DIRL1_ARATH -
2 Fugue 47.6325% -71 - C2 -2RKN - DIRL1_ARATH -
36 HHSearch 46.8218% -79 - C2 -3OB4 - ? -
32 HHSearch 46.0914%-127 - C2 -1B1U - IAAT_ELECO -
3 Fugue 44.3827% -91 - C2 -1L6H - NLTPX_ORYSJ -
7 Fugue 43.1015% -60 - C2 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
46 36.00100% 39 - C- -M046 - -
43 33.22100% 23 - C- -M043 - -
40 32.27100% 35 - C- -M040 - -
39 31.27100% 30 - C- -M039 - -