@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
ITCGQVQSALVPCLSYLKTTGPTPPATCCNGVRTINNAAKTTADRRTACQCLKSAAGSVKGLNPTTVAGLPGKCGVNIPYKISLSTNCATVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
16 HHSearch 95.0461%-128 - C3 -1T12 - NLTP1_TOBAC -
18 HHSearch 89.5263%-116 - C3 -2ALG 3.7 NLTP1_PRUPE
11 SP3 89.1759%-112 - C3 -1FK5 4.3 NLTP_MAIZE
19 HHSearch 88.5757%-111 - C3 -1SIY - NLTP1_VIGRR -
15 HHSearch 84.8460%-109 - C3 -1AFH - NLTP_MAIZE -
20 HHSearch 82.1546%-119 - C3 -1BWO 4.6 NLTP1_WHEAT
24 HHSearch 62.6222%-142 - C3 -1BEA - ITRF_MAIZE -
31 HHSearch 61.5128%-117 - C3 -1SM7 - ? -
27 HHSearch 53.4723%-115 - C3 -1B1U - IAAT_ELECO -
2 Fugue 47.7628% -69 - C3 -2RKN - DIRL1_ARATH -
21 HHSearch 47.2625% -78 - C3 -2RKN - DIRL1_ARATH -
29 HHSearch 43.9122% -82 - C3 -1PSY - 2SS_RICCO -
30 HHSearch 43.1327% -76 - C3 -3OB4 - ? -
9 Fugue 41.2918% -70 - C3 -1S6D - 2SS8_HELAN -
4 Fugue 41.0121% -62 - C3 -2CY7 - ATG4B_HUMAN -
28 HHSearch 40.8016%-100 - C3 -1S6D - 2SS8_HELAN -
5 Fugue 40.6223% -80 - C3 -1L6H - NLTPX_ORYSJ -
6 Fugue 39.5117% -54 - C3 -3UUN - DMD_HUMAN -
22 HHSearch 39.1222% -79 - C3 -1L6H - NLTPX_ORYSJ -
23 HHSearch 39.1021% -64 - C3 -1N89 - NLT2G_WHEAT -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
33 95.89100%-131 - C- -M033 - -
37 95.77100%-129 - C- -M037 - -
38 94.54100%-126 - C- -M038 - -
35 93.75100%-127 - C- -M035 - -