@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
AISCGQVSSALRPCISYASGNGGILPPACCSGVKRLAGAAQSTADKQAACKCIKSAAGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
30 SP3 92.8063%-131 - C5 -1FK5 6.1 NLTP_MAIZE
13 HHSearch 90.7951%-130 - C5 -2ALG 2.4 NLTP1_PRUPE
12 HHSearch 88.6057%-124 - C5 -1T12 - NLTP1_TOBAC -
11 HHSearch 87.7063%-122 - C5 -1AFH - NLTP_MAIZE -
16 HHSearch 87.1547%-140 - C5 -1BWO 4.3 NLTP1_WHEAT
15 HHSearch 84.9544%-142 - C5 -1SIY - NLTP1_VIGRR -
25 HHSearch 56.5131%-106 - C5 -1PSY - 2SS_RICCO -
23 HHSearch 52.5423%-126 - C5 -1BEA - ITRF_MAIZE -
24 HHSearch 50.4525% -96 - C5 -1SM7 - ? -
17 HHSearch 49.2122% -93 - C5 -2RKN - DIRL1_ARATH -
22 HHSearch 46.9116%-108 - C5 -1B1U - IAAT_ELECO -
2 Fugue 46.8723% -83 - C5 -2RKN - DIRL1_ARATH -
3 Fugue 46.7026% -88 - C5 -1L6H - NLTPX_ORYSJ -
27 HHSearch 44.5722%-118 - C5 -1S6D - 2SS8_HELAN -
34 SP3 41.1823% -76 - C5 -1L6H - NLTPX_ORYSJ -
32 SP3 38.4616% -87 - C5 -1QPO - NADC_MYCTU -
19 HHSearch 36.9428% -59 - C5 -1N89 - NLT2G_WHEAT -
26 HHSearch 36.6117% -71 - C5 -3OB4 - ? -
18 HHSearch 36.0532% -68 - C5 -1L6H - NLTPX_ORYSJ -
5 Fugue 35.9816% -63 - C5 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
40 99.49100%-140 - C- -M040 - -
42 95.07100%-147 - C- -M042 - -
43 92.86100%-150 - C- -M043 - -
44 91.40100%-140 - C- -M044 - -