@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




28 SP3 92.3565%-114 - C5 -1FK5 6.1 NLTP_MAIZE
12 HHSearch 89.8659%-122 - C5 -1T12 - NLTP1_TOBAC -
14 HHSearch 89.4951%-121 - C5 -2ALG 2.4 NLTP1_PRUPE
11 HHSearch 88.4566%-115 - C5 -1AFH - NLTP_MAIZE -
16 HHSearch 85.8747%-116 - C5 -1BWO 3.5 NLTP1_WHEAT
15 HHSearch 82.5142%-130 - C5 -1SIY - NLTP1_VIGRR -
23 HHSearch 58.8121%-131 - C5 -1BEA - ITRF_MAIZE -
27 HHSearch 58.7134%-110 - C5 -1PSY - 2SS_RICCO -
35 SP3 52.5118%-115 * C5 *1HSS - IAA1_WHEAT -
24 HHSearch 51.6422% -97 - C5 -1SM7 - ? -
17 HHSearch 48.5222% -84 - C5 -2RKN - DIRL1_ARATH -
3 Fugue 48.1328% -98 - C5 -1L6H - NLTPX_ORYSJ -
26 HHSearch 47.5822%-109 - C5 -1S6D - 2SS8_HELAN -
2 Fugue 45.8822% -85 - C5 -2RKN - DIRL1_ARATH -
29 SP3 45.6320% -70 - C5 -1L6H - NLTPX_ORYSJ -
22 HHSearch 44.8615%-103 - C5 -1B1U - IAAT_ELECO -
30 SP3 42.5317% -87 - C4 -1QPO - NADC_MYCTU -
25 HHSearch 40.1317% -78 - C5 -3OB4 - ? -
31 SP3 39.9012% -62 - C5 -1A0P - ? -
9 Fugue 39.4825% -55 - C5 -1PSY - 2SS_RICCO -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




40 98.57100%-151 - C- -M040 - -
37 94.83100%-125 - C- -M037 - -
43 90.85100%-120 - C- -M043 - -