@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKVH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
22 HHSearch 91.8456%-128 - C3 -1T12 - NLTP1_TOBAC -
11 SP3 89.5758%-115 - C3 -1FK5 6.1 NLTP_MAIZE
24 HHSearch 89.2952%-131 - C3 -2ALG - NLTP1_PRUPE -
21 HHSearch 86.6758%-115 - C3 -1AFH - NLTP_MAIZE -
26 HHSearch 81.8044%-119 - C3 -1BWO 4.5 NLTP1_WHEAT
25 HHSearch 78.8543%-123 - C3 -1SIY - NLTP1_VIGRR -
33 HHSearch 60.1019%-157 - C3 -1BEA - ITRF_MAIZE -
35 HHSearch 54.6922%-104 - C3 -1SM7 - ? -
15 SP3 48.8817%-130 - C3 -1HSS - IAA1_WHEAT -
5 Fugue 48.4621% -74 - C3 -1S6D - 2SS8_HELAN -
37 HHSearch 47.3624% -90 - C3 -1PSY - 2SS_RICCO -
6 Fugue 47.3520% -95 - C3 -4HR1 - ? -
19 SP3 46.7516%-121 - C3 -1QPO - NADC_MYCTU -
36 HHSearch 43.3918%-100 - C3 -3OB4 - ? -
32 HHSearch 43.2215%-107 - C3 -1B1U - IAAT_ELECO -
10 Fugue 42.1923% -44 - C3 -1PSY - 2SS_RICCO -
34 HHSearch 42.1619%-101 - C3 -1S6D - 2SS8_HELAN -
27 HHSearch 42.1223% -70 - C3 -2RKN - DIRL1_ARATH -
3 Fugue 41.5927% -83 - C3 -1L6H - NLTPX_ORYSJ -
2 Fugue 39.5122% -62 - C3 -2RKN - DIRL1_ARATH -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
39 94.63100%-128 - C- -M039 - -
43 92.58100%-135 - C- -M043 - -
40 40.46100% - - C- -M040 - -
44 40.45100% - - C- -M044 - -