@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
AITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAYNAGRAAGIPSRCGVSVPYTISASVDCSKIH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
29 SP3 95.0362%-119 - C4 -1FK5 6.3 NLTP_MAIZE
11 HHSearch 94.1162%-115 - C4 -1AFH - NLTP_MAIZE -
12 HHSearch 91.9559%-126 - C4 -1T12 - NLTP1_TOBAC -
16 HHSearch 89.2148%-128 - C4 -1BWO 4.6 NLTP1_WHEAT
14 HHSearch 88.4848%-130 - C4 -2ALG 3.8 NLTP1_PRUPE
15 HHSearch 86.7942%-122 - C4 -1SIY - NLTP1_VIGRR -
25 HHSearch 61.7421%-107 - C4 -1SM7 - ? -
24 HHSearch 61.6621%-132 - C4 -1BEA - ITRF_MAIZE -
33 SP3 59.1718%-129 * C4 *1HSS - IAA1_WHEAT -
26 HHSearch 55.2530% -89 - C4 -1PSY - 2SS_RICCO -
4 Fugue 54.2527% -45 - C4 -1PSY - 2SS_RICCO -
2 Fugue 52.5426% -78 - C4 -2RKN - DIRL1_ARATH -
23 HHSearch 51.9619%-114 - C4 -1S6D - 2SS8_HELAN -
17 HHSearch 50.6423% -69 - C4 -2RKN - DIRL1_ARATH -
27 HHSearch 50.4217% -85 - C4 -3OB4 - ? -
9 Fugue 48.7410% -75 - C4 -2FJ6 - YOZE_BACSU -
3 Fugue 46.6227% -87 - C4 -1L6H - NLTPX_ORYSJ -
22 HHSearch 45.3515% -96 - C4 -1B1U - IAAT_ELECO -
31 SP3 42.1716%-102 - C3 -1QPO - NADC_MYCTU -
30 SP3 41.7721% -66 - C4 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
43 98.32100%-125 - C- -M043 - -
45 97.74100%-136 - C- -M045 - -